Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC011476.5-201ENST00000615594 130 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 MIR7112-201ENST00000616126 65 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 MIR376A1-201ENST00000616574 68 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 AC091953.5-201ENST00000622919 233 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 AC073476.4-201ENST00000628409 72 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 MIR7153-201ENST00000637758 57 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TIMP4Q99727 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TIMP4Q99727 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TIMP4Q99727 AC007256.1-201ENST00000392253 2765 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TIMP4Q99727 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TIMP4Q99727 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TIMP4Q99727 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
TIMP4Q99727 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TIMP4Q99727 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TIMP4Q99727 Y_RNA.54-201ENST00000362766 105 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 snoU2_19.2-201ENST00000363024 80 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 RNU6-778P-201ENST00000363269 103 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 RNA5SP197-201ENST00000363357 119 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 SNORA38.1-201ENST00000364172 131 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 Y_RNA.237-201ENST00000364439 102 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 RNU1-73P-201ENST00000383971 164 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 SNORD116-20-201ENST00000384529 92 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 MIR32-201ENST00000384965 70 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 MIR518D-201ENST00000385014 87 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 MIR483-201ENST00000385070 76 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 MIR23A-201ENST00000385245 73 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TIMP4Q99727 AL358453.1-201ENST00000422522 250 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 TMEM167AP1-201ENST00000423409 219 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 AC243964.1-201ENST00000441814 261 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 AL031659.1-201ENST00000447075 539 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.02□□□□□ -1.93
TIMP4Q99727 MTATP6P7-201ENST00000453315 681 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 AC006026.2-201ENST00000457376 180 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 AC091874.1-201ENST00000511402 339 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 SNORA64.4-201ENST00000516632 81 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 Y_RNA.713-201ENST00000517013 96 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 RN7SKP57-201ENST00000517248 293 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 AC107934.2-201ENST00000518653 310 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 AC068657.1-201ENST00000520807 306 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 AP002770.2-201ENST00000543613 532 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.02□□□□□ -1.93
TIMP4Q99727 AC136932.1-201ENST00000574771 208 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 MIR4474-201ENST00000579189 78 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 AP001282.2-201ENST00000616149 309 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TIMP4Q99727 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TIMP4Q99727 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TIMP4Q99727 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
TIMP4Q99727 AF117829.1-206ENST00000621883 3802 ntBASIC3.02□□□□□ -1.93
TIMP4Q99727 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TIMP4Q99727 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.01□□□□□ -1.93
TIMP4Q99727 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.01□□□□□ -1.93
TIMP4Q99727 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
TIMP4Q99727 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TIMP4Q99727 AL391987.6-201ENST00000305671 199 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 MIR148B-201ENST00000362252 99 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 RNU6-858P-201ENST00000362436 107 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 SNORD56.1-201ENST00000362913 68 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 RNU6-942P-201ENST00000363002 107 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 RNU6-338P-201ENST00000383888 105 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 RNU6-926P-201ENST00000384075 107 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 RNU6-209P-201ENST00000384118 107 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 SNORD115-46-201ENST00000390982 71 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 Y_RNA.602-201ENST00000410535 92 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 RNU6-1245P-201ENST00000411130 106 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.01□□□□□ -1.93
TIMP4Q99727 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.01□□□□□ -1.93
TIMP4Q99727 MTND2P29-201ENST00000438595 412 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 AL590664.1-201ENST00000448065 339 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 RPL37P4-201ENST00000448908 268 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 RPL23AP67-201ENST00000465341 474 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 RPL30P1-201ENST00000488676 339 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 SNORA74D-201ENST00000516404 141 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 RNA5SP468-201ENST00000516782 93 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 RNU6-928P-201ENST00000516876 104 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.01□□□□□ -1.93
TIMP4Q99727 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.01□□□□□ -1.93
TIMP4Q99727 AC090617.3-201ENST00000573670 475 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 AL162713.1-201ENST00000604480 262 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 Y_RNA.772-201ENST00000606692 102 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.01□□□□□ -1.93
TIMP4Q99727 U2.21-201ENST00000637295 81 ntBASIC3.01□□□□□ -1.93
TIMP4Q99727 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
TIMP4Q99727 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TIMP4Q99727 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.01□□□□□ -1.93
TIMP4Q99727 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TIMP4Q99727 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3□□□□□ -1.93
TIMP4Q99727 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3□□□□□ -1.93
TIMP4Q99727 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TIMP4Q99727 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TIMP4Q99727 Y_RNA.65-201ENST00000362846 100 ntBASIC3□□□□□ -1.93
TIMP4Q99727 RNU1-140P-201ENST00000365040 165 ntBASIC3□□□□□ -1.93
TIMP4Q99727 Y_RNA.416-201ENST00000384014 113 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms