Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC004383.1-201ENST00000438135 289 ntBASIC2.8□□□□□ -1.96
SIN3AQ96ST3 AL031274.1-201ENST00000450334 232 ntBASIC2.8□□□□□ -1.96
SIN3AQ96ST3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.8□□□□□ -1.96
SIN3AQ96ST3 AC090255.1-201ENST00000495779 349 ntBASIC2.8□□□□□ -1.96
SIN3AQ96ST3 RPS29P11-201ENST00000496507 171 ntBASIC2.8□□□□□ -1.96
SIN3AQ96ST3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.8□□□□□ -1.96
SIN3AQ96ST3 AC008526.1-201ENST00000509149 338 ntBASIC2.8□□□□□ -1.96
SIN3AQ96ST3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.8□□□□□ -1.96
SIN3AQ96ST3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.8□□□□□ -1.96
SIN3AQ96ST3 RNU6-875P-201ENST00000516488 106 ntBASIC2.8□□□□□ -1.96
SIN3AQ96ST3 RNU6-273P-201ENST00000516937 96 ntBASIC2.8□□□□□ -1.96
SIN3AQ96ST3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.8□□□□□ -1.96
SIN3AQ96ST3 AC104576.1-201ENST00000524225 88 ntBASIC2.8□□□□□ -1.96
SIN3AQ96ST3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.8□□□□□ -1.96
SIN3AQ96ST3 CR383656.8-201ENST00000549046 145 ntBASIC2.8□□□□□ -1.96
SIN3AQ96ST3 AC008739.2-201ENST00000597006 317 ntBASIC2.8□□□□□ -1.96
SIN3AQ96ST3 AL355877.2-201ENST00000603670 358 ntBASIC2.8□□□□□ -1.96
SIN3AQ96ST3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.8□□□□□ -1.96
SIN3AQ96ST3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.8□□□□□ -1.96
SIN3AQ96ST3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SIN3AQ96ST3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.8□□□□□ -1.96
SIN3AQ96ST3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SIN3AQ96ST3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SIN3AQ96ST3 SNORD116-11-201ENST00000383882 92 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 RNU6-214P-201ENST00000384130 107 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 SNORD116-20-201ENST00000384529 92 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 RNU6-19P-201ENST00000384718 107 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.79□□□□□ -1.96
SIN3AQ96ST3 AL590632.1-201ENST00000424289 371 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 HMGN2P3-201ENST00000433603 273 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 HMGN2P5-201ENST00000436882 273 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 MTND4LP16-201ENST00000440828 295 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.79□□□□□ -1.96
SIN3AQ96ST3 AL513124.1-201ENST00000450410 614 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 PPP1R2P5-201ENST00000457256 603 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 AC107626.1-201ENST00000471084 183 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 MED28P2-201ENST00000475771 317 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.79□□□□□ -1.96
SIN3AQ96ST3 MRPS36P2-201ENST00000512569 299 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 RNU1-40P-201ENST00000516816 164 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 RNU1-97P-201ENST00000516872 164 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 AC109479.2-201ENST00000517842 174 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 AC103996.1-201ENST00000555468 102 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.79□□□□□ -1.96
SIN3AQ96ST3 AC110588.1-201ENST00000559699 137 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 AC009994.1-201ENST00000606889 253 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.79□□□□□ -1.96
SIN3AQ96ST3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.78□□□□□ -1.96
SIN3AQ96ST3 RNU6-858P-201ENST00000362436 107 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 RNU6-105P-201ENST00000363909 104 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 RNU6-1013P-201ENST00000384180 107 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AL356432.1-201ENST00000405809 419 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 RNU2-25P-201ENST00000411041 191 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.78□□□□□ -1.96
SIN3AQ96ST3 MTCO2P3-201ENST00000442543 421 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AMD1P1-201ENST00000457220 922 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AC103851.1-201ENST00000506833 274 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 RNU6-566P-201ENST00000516790 107 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 HSPE1P18-201ENST00000517602 280 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AP005639.2-201ENST00000527592 928 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AC026371.1-201ENST00000551867 419 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AL022345.1-201ENST00000607292 135 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AC104260.1-201ENST00000616660 539 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.78□□□□□ -1.96
SIN3AQ96ST3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.78□□□□□ -1.96
SIN3AQ96ST3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
SIN3AQ96ST3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SIN3AQ96ST3 RNU6-562P-201ENST00000362731 107 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 Y_RNA.70-201ENST00000362886 110 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 RNU6-336P-201ENST00000364891 107 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 RNU6-843P-201ENST00000384454 104 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 RNU6-748P-201ENST00000384648 107 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 RNU6-95P-201ENST00000384697 107 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 UBE2V1P4-201ENST00000425374 344 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.77□□□□□ -1.97
SIN3AQ96ST3 MTND1P11-201ENST00000456661 876 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 RPL31P41-201ENST00000477967 372 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 AP001025.1-201ENST00000486139 332 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 RNU6-377P-201ENST00000515965 102 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 SNORA31.6-201ENST00000516241 130 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 RNA5SP82-201ENST00000516707 92 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 SNORA31.23-201ENST00000517219 133 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 RNA5SP454-201ENST00000517231 127 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.77□□□□□ -1.97
SIN3AQ96ST3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.77□□□□□ -1.97
SIN3AQ96ST3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.77□□□□□ -1.97
SIN3AQ96ST3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.77□□□□□ -1.97
SIN3AQ96ST3 AC091135.1-201ENST00000585943 307 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.77□□□□□ -1.97
SIN3AQ96ST3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 AL008636.1-201ENST00000625038 1018 ntBASIC2.77□□□□□ -1.97
SIN3AQ96ST3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SIN3AQ96ST3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
SIN3AQ96ST3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms