| BBC3 | Q96PG8 | ASAH1-265 | ENST00000637922 | 2297 nt | TSL 5 BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | MEI4-201 | ENST00000602452 | 4800 nt | APPRIS P1 TSL 5 BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU6-884P-201 | ENST00000363889 | 107 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU6-105P-201 | ENST00000363909 | 104 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.233-201 | ENST00000364407 | 101 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU4-9P-201 | ENST00000364951 | 139 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Z98749.2-208 | ENST00000381646 | 500 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU6-926P-201 | ENST00000384075 | 107 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | SNORA70B-201 | ENST00000384210 | 135 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | BTF3L4P2-201 | ENST00000392798 | 346 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.590-201 | ENST00000410140 | 107 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNA5SP239-201 | ENST00000410218 | 129 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AL603825.1-201 | ENST00000438481 | 80 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC020743.3-201 | ENST00000440351 | 360 nt | TSL 3 BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | HMGB3P8-201 | ENST00000449709 | 577 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | snoU13.30-201 | ENST00000458951 | 104 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RN7SL863P-201 | ENST00000462370 | 296 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | SNORA43.2-201 | ENST00000516652 | 128 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC020895.1-201 | ENST00000595362 | 272 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | SNORD113-5-201 | ENST00000607261 | 78 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | MCF2-202 | ENST00000370573 | 2583 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | PHF6-201 | ENST00000332070 | 4759 nt | APPRIS P2 TSL 1 (best) BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | CCDC146-201 | ENST00000285871 | 3333 nt | APPRIS P2 TSL 1 (best) BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | EFHC1-205 | ENST00000538167 | 5308 nt | TSL 5 BASIC | 3.07 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | CUL3-203 | ENST00000409096 | 2701 nt | TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AGL-206 | ENST00000370165 | 7106 nt | APPRIS P1 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | PCDH11X-206 | ENST00000373097 | 9146 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.8-201 | ENST00000362353 | 102 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.275-201 | ENST00000364726 | 110 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | PRKAA2-201 | ENST00000371244 | 9347 nt | APPRIS P2 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | CYSLTR1-201 | ENST00000373304 | 2576 nt | APPRIS P1 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU1-73P-201 | ENST00000383971 | 164 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU6-918P-201 | ENST00000391219 | 106 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | HDGFP1-201 | ENST00000405943 | 252 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU6-394P-201 | ENST00000410735 | 107 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU2-61P-201 | ENST00000411069 | 191 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | LINC01701-201 | ENST00000419614 | 451 nt | TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | BX322639.1-202 | ENST00000423987 | 2213 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AL672296.1-201 | ENST00000427780 | 2158 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC005550.3-201 | ENST00000451240 | 3743 nt | TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC092162.2-204 | ENST00000451851 | 566 nt | TSL 4 BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | HMGN2P7-201 | ENST00000456186 | 273 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RN7SKP272-201 | ENST00000516988 | 232 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | MRPS18CP4-201 | ENST00000535821 | 231 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | MIR4282-201 | ENST00000583613 | 67 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC010928.2-201 | ENST00000588017 | 287 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC008725.1-201 | ENST00000605123 | 2263 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | MIR663AHG-231 | ENST00000609044 | 590 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC104465.1-201 | ENST00000611365 | 139 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | U2.21-201 | ENST00000637295 | 81 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC010733.2-201 | ENST00000589496 | 5702 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | ANKRD36C-202 | ENST00000456556 | 5428 nt | APPRIS P1 TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | KMO-204 | ENST00000366559 | 5261 nt | APPRIS P2 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | THOC2-202 | ENST00000355725 | 4930 nt | APPRIS P1 TSL 5 BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | DNAH6-201 | ENST00000237449 | 12666 nt | APPRIS P1 TSL 5 BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU6-778P-201 | ENST00000363269 | 103 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.398-201 | ENST00000383952 | 99 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU6-1027P-201 | ENST00000383998 | 107 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU6-318P-201 | ENST00000384283 | 103 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.569-201 | ENST00000384749 | 103 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU4-30P-201 | ENST00000410245 | 143 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RNU6-1245P-201 | ENST00000411130 | 106 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | TRAPPC2P4-201 | ENST00000421750 | 331 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AL445259.1-203 | ENST00000427828 | 251 nt | TSL 3 BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | NDUFB1P1-201 | ENST00000435191 | 180 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC069285.2-201 | ENST00000440210 | 275 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AL121580.1-201 | ENST00000449941 | 219 nt | TSL 3 BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | RN7SL585P-201 | ENST00000470538 | 280 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC010265.1-201 | ENST00000513509 | 211 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.679-201 | ENST00000516416 | 91 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC027288.2-201 | ENST00000553028 | 243 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | LINC01630-204 | ENST00000582689 | 539 nt | TSL 4 BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC024153.1-201 | ENST00000603103 | 365 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC005696.2-201 | ENST00000610120 | 626 nt | TSL 3 BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC004825.2-201 | ENST00000616634 | 455 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Xist_exon1.1-201 | ENST00000618930 | 85 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | KCNQ1OT1_5.1-201 | ENST00000621902 | 226 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | LRRN3-203 | ENST00000422987 | 3513 nt | APPRIS P1 TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | MLH1-212 | ENST00000455445 | 2296 nt | TSL 2 BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | CKAP5-201 | ENST00000312055 | 6532 nt | TSL 5 BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | GLIPR1-201 | ENST00000266659 | 5877 nt | APPRIS P1 TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | TENM1-201 | ENST00000371130 | 12875 nt | APPRIS P3 TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | MCMDC2-207 | ENST00000492775 | 1831 nt | TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC009541.1-201 | ENST00000438279 | 2662 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | PREPL-206 | ENST00000409936 | 5212 nt | APPRIS P1 TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC233981.2-201 | ENST00000611524 | 1614 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | CASC1-203 | ENST00000395987 | 2363 nt | APPRIS P3 TSL 1 (best) BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | DENND2C-203 | ENST00000393277 | 4730 nt | TSL 5 BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | KLHL13-208 | ENST00000541812 | 3102 nt | TSL 2 BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | DMD-207 | ENST00000378677 | 13932 nt | APPRIS ALT2 TSL 5 BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | VPS13A-206 | ENST00000376646 | 2262 nt | TSL 5 BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | LINC01247-201 | ENST00000448901 | 4209 nt | TSL 1 (best) BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | AC062016.1-201 | ENST00000355719 | 319 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | SNORA25.1-201 | ENST00000362326 | 128 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.82-201 | ENST00000363000 | 102 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.92-201 | ENST00000363043 | 102 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.235-201 | ENST00000364412 | 102 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.306-201 | ENST00000365015 | 102 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.312-201 | ENST00000365089 | 102 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| BBC3 | Q96PG8 | Y_RNA.322-201 | ENST00000365151 | 102 nt | BASIC | 3.04 | □□□□□ -1.92 | | |