Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MIR518D-201ENST00000385014 87 ntBASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 RNA5SP225-201ENST00000410874 135 ntBASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 AC007969.2-201ENST00000441891 191 ntBASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 AC000111.2-201ENST00000448200 210 ntBASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 RPS29P2-201ENST00000479278 136 ntBASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 RNU6-1146P-201ENST00000516282 102 ntBASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 Y_RNA.690-201ENST00000516603 95 ntBASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 MIR5685-201ENST00000579080 79 ntBASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 AC131055.1-201ENST00000584626 316 ntBASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 FTX_3.1-201ENST00000610451 147 ntBASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 TLK1P1-201ENST00000456760 2440 ntBASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.37□□□□□ -1.71
CNTNAP3BQ96NU0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 MIR367-201ENST00000362299 68 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RNU1-83P-201ENST00000363426 164 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RNU6-309P-201ENST00000364573 106 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 Y_RNA.341-201ENST00000365341 102 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 Z98749.2-208ENST00000381646 500 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RNU6-1264P-201ENST00000383891 107 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RNU6-136P-201ENST00000384663 107 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 MIR659-201ENST00000384963 97 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 MIR325-201ENST00000385260 98 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RPL21P65-201ENST00000406094 466 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 MIR1302-5-201ENST00000408164 150 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 MIR1278-201ENST00000408753 81 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RN7SKP61-201ENST00000410642 295 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RPL23AP14-201ENST00000468281 468 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RN7SL429P-201ENST00000479090 223 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RN7SL489P-201ENST00000486185 223 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RN7SL327P-201ENST00000488659 223 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 AC104984.5-201ENST00000586878 94 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 RN7SL853P-201ENST00000617250 223 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 BMS1P21-201ENST00000634565 365 ntBASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.36□□□□□ -1.71
CNTNAP3BQ96NU0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 AC073073.2-201ENST00000609827 2578 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 RNU1-62P-201ENST00000362599 164 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 Y_RNA.220-201ENST00000364244 109 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 RNU1-140P-201ENST00000365040 165 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 Y_RNA.544-201ENST00000384650 113 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 SNORD12C-201ENST00000386307 89 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 RNU6-383P-201ENST00000410864 94 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 Y_RNA.622-201ENST00000411091 108 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 ABCF2P2-201ENST00000450549 296 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 AC078918.1-201ENST00000498515 228 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 AC105129.1-201ENST00000560250 297 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 RN7SL600P-201ENST00000581811 299 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 AC019159.1-201ENST00000605094 187 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 AL121932.1-201ENST00000605542 214 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 U2.21-201ENST00000637295 81 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 AC107068.1-201ENST00000563286 4218 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 AC092435.4-201ENST00000623012 4159 ntBASIC4.35□□□□□ -1.71
CNTNAP3BQ96NU0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTNAP3BQ96NU0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTNAP3BQ96NU0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.34□□□□□ -1.71
CNTNAP3BQ96NU0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTNAP3BQ96NU0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTNAP3BQ96NU0 AL161912.2-201ENST00000565707 3007 ntBASIC4.34□□□□□ -1.71
CNTNAP3BQ96NU0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.34□□□□□ -1.71
CNTNAP3BQ96NU0 AC021146.4-201ENST00000309229 279 ntBASIC4.34□□□□□ -1.71
CNTNAP3BQ96NU0 RNU6-727P-201ENST00000363592 107 ntBASIC4.34□□□□□ -1.71
CNTNAP3BQ96NU0 Y_RNA.221-201ENST00000364248 96 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms