Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC138Q96M89 AL355297.2-201ENST00000604792 129 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 AC018462.2-201ENST00000605375 395 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 AC009994.1-201ENST00000606889 253 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 Z82195.2-201ENST00000612348 18351 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC138Q96M89 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC138Q96M89 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 Y_RNA.70-201ENST00000362886 110 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 VTRNA1-1-201ENST00000363120 99 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 Y_RNA.263-201ENST00000364659 114 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 RNA5SP125-201ENST00000364843 120 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 RNU6-1286P-201ENST00000383871 107 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 RNU6-968P-201ENST00000384076 107 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 MIR128-1-201ENST00000384921 82 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 MIR95-201ENST00000385072 81 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC138Q96M89 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC138Q96M89 AP004217.1-201ENST00000480579 346 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC138Q96M89 AC026782.1-201ENST00000512952 449 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 RNU6-826P-201ENST00000516827 104 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC138Q96M89 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC138Q96M89 AL078605.1-201ENST00000603529 500 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 AC007318.2-201ENST00000620999 243 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC138Q96M89 AC069528.2-201ENST00000624849 1991 ntBASIC2.92□□□□□ -1.94
CCDC138Q96M89 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC138Q96M89 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC138Q96M89 AL161431.1-201ENST00000618966 4205 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC138Q96M89 SNORD50.1-201ENST00000362987 71 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 RNU6-1050P-201ENST00000410388 107 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 HMGB3P2-201ENST00000411913 584 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC138Q96M89 AL513124.1-201ENST00000450410 614 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 MTND4P17-201ENST00000470444 350 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 RPS29P2-201ENST00000479278 136 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 AC090096.1-201ENST00000489168 390 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC138Q96M89 RNA5SP341-201ENST00000516261 117 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 Y_RNA.708-201ENST00000516950 96 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 AP002404.1-201ENST00000532005 451 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC138Q96M89 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC138Q96M89 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC138Q96M89 Z98751.3-201ENST00000604447 521 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 AC113139.1-201ENST00000605049 239 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 AC016727.1-205ENST00000605437 569 ntBASIC2.91□□□□□ -1.94
CCDC138Q96M89 AC233981.2-201ENST00000611524 1614 ntBASIC2.9□□□□□ -1.94
CCDC138Q96M89 MTND5P9-201ENST00000503854 1755 ntBASIC2.9□□□□□ -1.94
CCDC138Q96M89 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CCDC138Q96M89 RNU4-15P-201ENST00000362613 141 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 SNORA29-201ENST00000384183 140 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 SNORA36A-201ENST00000384221 132 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 Y_RNA.474-201ENST00000384341 102 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 RNU6-174P-201ENST00000410406 106 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 AC012306.1-201ENST00000423267 114 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 AC236972.1-201ENST00000433225 199 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC138Q96M89 RNU7-26P-201ENST00000458980 63 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC138Q96M89 AC117440.1-201ENST00000474107 571 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC138Q96M89 FGF7P4-201ENST00000509595 295 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC138Q96M89 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC138Q96M89 MRPS36P4-201ENST00000534436 298 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC138Q96M89 AC107016.2-201ENST00000547968 190 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 AC109446.1-201ENST00000566172 220 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 AC011494.1-201ENST00000596454 237 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 AL132765.2-201ENST00000610812 351 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 AC009318.2-201ENST00000610917 651 ntBASIC2.9□□□□□ -1.95
CCDC138Q96M89 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC138Q96M89 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CCDC138Q96M89 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC138Q96M89 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC138Q96M89 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC138Q96M89 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC138Q96M89 MIR422A-201ENST00000362286 90 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 RNU6-1059P-201ENST00000363752 98 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 RNU6-1274P-201ENST00000384557 107 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 Y_RNA.594-201ENST00000410373 140 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 AL353705.4-201ENST00000449661 238 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 AC079354.2-201ENST00000453523 154 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 AC021146.2-201ENST00000504736 556 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC138Q96M89 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC138Q96M89 RPL23AP94-201ENST00000512518 302 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 SNORA48.11-201ENST00000517015 89 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC138Q96M89 CYP4A27P-201ENST00000567218 190 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 AC116312.1-201ENST00000606841 314 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 Y_RNA.804-201ENST00000615262 101 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 PISRT1.1-201ENST00000616930 107 ntBASIC2.89□□□□□ -1.95
CCDC138Q96M89 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC138Q96M89 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CCDC138Q96M89 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms