Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 AC093249.1-201ENST00000567049 203 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 ELOCP5-201ENST00000604924 333 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 AL138963.2-201ENST00000605137 226 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 AC103705.1-201ENST00000619013 241 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 AC090617.10-201ENST00000624308 134 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 FER-210ENST00000628534 558 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 MIR3688-2-201ENST00000636963 87 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 MIR3529-201ENST00000637713 78 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 AC241585.2-209ENST00000638217 143 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
LINC00477Q96M19 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
LINC00477Q96M19 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LINC00477Q96M19 SNORA36A-201ENST00000384221 132 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 Y_RNA.619-201ENST00000410951 90 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC00477Q96M19 AL590632.1-201ENST00000424289 371 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 AC013470.1-201ENST00000453438 462 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.49□□□□□ -2.17
LINC00477Q96M19 RNU6-1208P-201ENST00000459588 107 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 MTAPP1-201ENST00000489154 819 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 AC018868.1-201ENST00000491307 315 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC00477Q96M19 RPL22P13-201ENST00000493291 347 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 LRRC34P2-201ENST00000514850 553 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 RNU6-189P-201ENST00000516120 101 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.49□□□□□ -2.17
LINC00477Q96M19 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC00477Q96M19 AC025423.5-201ENST00000550230 219 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC00477Q96M19 AC243960.4-201ENST00000600532 288 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 AL355297.2-201ENST00000604792 129 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 AL159153.1-201ENST00000619688 317 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.49□□□□□ -2.17
LINC00477Q96M19 SCARNA4-202ENST00000625402 129 ntBASIC1.49□□□□□ -2.17
LINC00477Q96M19 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LINC00477Q96M19 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
LINC00477Q96M19 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LINC00477Q96M19 MIR449A-201ENST00000362113 91 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 RNU4-82P-201ENST00000362443 140 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 RNY4P14-201ENST00000363656 96 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 RNU6-944P-201ENST00000364023 107 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 U3.13-201ENST00000364804 214 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 Y_RNA.505-201ENST00000384489 102 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 MIR544A-201ENST00000384855 91 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 MIR186-201ENST00000384988 86 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 RAP1BP3-201ENST00000407180 549 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 RNU6-293P-201ENST00000411259 106 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 RPL30P16-201ENST00000419341 429 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 UBE2V1P8-201ENST00000437166 265 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 AC009238.1-201ENST00000442165 424 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 RPL23AP6-201ENST00000446637 472 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 AC009237.6-201ENST00000446969 424 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 CYP2C59P-201ENST00000457790 269 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 AC092436.3-201ENST00000511788 257 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 MIR1273D-201ENST00000577266 86 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 MIR3942-201ENST00000585264 109 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 AL162413.1-201ENST00000603198 110 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 AC107304.1-201ENST00000604229 296 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 U2.17-201ENST00000611454 95 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 AL773524.1-201ENST00000614065 229 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 AC007014.2-201ENST00000615581 479 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 uc_338.11-201ENST00000619132 160 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 MIR5739-201ENST00000619803 80 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 MIR6852-201ENST00000621699 66 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.48□□□□□ -2.17
LINC00477Q96M19 SCARNA15.3-201ENST00000626315 122 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 SCARNA4.1-201ENST00000628597 123 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 AL450472.1-202ENST00000637286 180 ntBASIC1.48□□□□□ -2.17
LINC00477Q96M19 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
LINC00477Q96M19 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LINC00477Q96M19 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
LINC00477Q96M19 snoU2_19.1-201ENST00000362361 80 ntBASIC1.47□□□□□ -2.17
LINC00477Q96M19 SNORD32A-201ENST00000364805 84 ntBASIC1.47□□□□□ -2.17
LINC00477Q96M19 Y_RNA.373-201ENST00000365600 103 ntBASIC1.47□□□□□ -2.17
LINC00477Q96M19 Y_RNA.510-201ENST00000384511 114 ntBASIC1.47□□□□□ -2.17
LINC00477Q96M19 RNU6-1274P-201ENST00000384557 107 ntBASIC1.47□□□□□ -2.17
LINC00477Q96M19 SNORA64-201ENST00000384674 134 ntBASIC1.47□□□□□ -2.17
LINC00477Q96M19 SNORA12-201ENST00000391162 147 ntBASIC1.47□□□□□ -2.17
LINC00477Q96M19 RNU6-192P-201ENST00000391253 100 ntBASIC1.47□□□□□ -2.17
LINC00477Q96M19 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms