Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC092447.9-201ENST00000603395 144 ntBASIC3.07□□□□□ -1.92
CCDC17Q96LX7 AC018889.1-201ENST00000605372 397 ntBASIC3.07□□□□□ -1.92
CCDC17Q96LX7 AC008962.1-201ENST00000605729 304 ntBASIC3.07□□□□□ -1.92
CCDC17Q96LX7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC17Q96LX7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC17Q96LX7 CDC27P3-201ENST00000635418 1910 ntBASIC3.07□□□□□ -1.92
CCDC17Q96LX7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC17Q96LX7 SNORD50.1-201ENST00000362987 71 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 Y_RNA.428-201ENST00000384078 102 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 RNU6-933P-201ENST00000384424 107 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 RNU6-1105P-201ENST00000384774 107 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 RNU6-1106P-201ENST00000390845 107 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 MTND3P9-201ENST00000429526 346 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 AC091812.1-201ENST00000432235 1948 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 AC244505.4-201ENST00000434905 287 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 MTND3P2-201ENST00000438452 342 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 SSXP5-201ENST00000443473 287 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 MTND5P22-201ENST00000458380 195 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 MTND5P16-201ENST00000460269 1703 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 RPL17P19-201ENST00000489069 552 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 CUL1P1-201ENST00000509510 2425 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 RNA5SP385-201ENST00000515947 110 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 SNORA43.2-201ENST00000516652 128 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 RNU4-77P-201ENST00000516692 156 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 RNU6-612P-201ENST00000516909 102 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 AC010653.1-201ENST00000571108 881 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 MIR5696-201ENST00000578474 85 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 AC020895.1-201ENST00000595362 272 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 SNORD58B-201ENST00000607313 66 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC17Q96LX7 MIR8076-201ENST00000611401 83 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 AC008121.3-201ENST00000618726 433 ntBASIC3.06□□□□□ -1.92
CCDC17Q96LX7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CCDC17Q96LX7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC17Q96LX7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC17Q96LX7 RNY1P16-201ENST00000363063 111 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 RNA5SP126-201ENST00000365092 109 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 RNU1-100P-201ENST00000365255 165 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 MIR568-201ENST00000385036 95 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 MIR27B-201ENST00000385129 97 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 AL591034.2-201ENST00000402839 359 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 Y_RNA.605-201ENST00000410577 105 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 RPL26P27-201ENST00000414397 437 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 HMGN2P30-201ENST00000423237 256 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC17Q96LX7 RNU6-307P-201ENST00000516743 106 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC17Q96LX7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC17Q96LX7 MIR4506-201ENST00000584693 77 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 AC078899.3-201ENST00000599065 212 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 AL355598.1-201ENST00000604169 202 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 AC004852.3-201ENST00000614131 326 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 MIR6134-201ENST00000617606 109 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 AL162373.1-201ENST00000620433 407 ntBASIC3.05□□□□□ -1.92
CCDC17Q96LX7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC17Q96LX7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC17Q96LX7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 RNY3P11-201ENST00000364153 102 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 RNU6-26P-201ENST00000383985 107 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 SNORA67.4-201ENST00000384688 142 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 RNU6-1156P-201ENST00000410365 100 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 AC096644.2-201ENST00000429278 159 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 AL353752.1-201ENST00000454946 260 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 BTF3P15-201ENST00000455606 336 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 MTATP8P1-201ENST00000467115 207 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 SNORD59.2-201ENST00000516873 68 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 AL391261.3-201ENST00000557194 520 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 MIR4298-201ENST00000584380 73 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 HMGB1P24-202ENST00000615653 685 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 U4.3-201ENST00000621047 82 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 AC097372.5-201ENST00000623665 376 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.04□□□□□ -1.92
CCDC17Q96LX7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCDC17Q96LX7 AC022336.2-201ENST00000568966 2538 ntBASIC3.03□□□□□ -1.92
CCDC17Q96LX7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC17Q96LX7 ZNF72P-201ENST00000425869 1908 ntBASIC3.03□□□□□ -1.92
CCDC17Q96LX7 RNU6-105P-201ENST00000363909 104 ntBASIC3.03□□□□□ -1.92
CCDC17Q96LX7 RNU1-115P-201ENST00000365329 160 ntBASIC3.03□□□□□ -1.92
CCDC17Q96LX7 RNU6-301P-201ENST00000384277 107 ntBASIC3.03□□□□□ -1.92
CCDC17Q96LX7 RPS4XP3-201ENST00000398541 413 ntBASIC3.03□□□□□ -1.92
CCDC17Q96LX7 RNU2-23P-201ENST00000410545 195 ntBASIC3.03□□□□□ -1.92
CCDC17Q96LX7 BPY2DP-201ENST00000422208 265 ntBASIC3.03□□□□□ -1.92
CCDC17Q96LX7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC17Q96LX7 SNRPEP4-201ENST00000435815 279 ntBASIC3.03□□□□□ -1.92
CCDC17Q96LX7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC17Q96LX7 snoU13.28-201ENST00000459235 104 ntBASIC3.03□□□□□ -1.92
CCDC17Q96LX7 AC103975.1-201ENST00000482506 483 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms