Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 Y_RNA.301-201ENST00000364990 103 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 Y_RNA.373-201ENST00000365600 103 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 MT-TD-201ENST00000387419 68 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 RPS29P13-201ENST00000402041 169 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 CBX3P9-201ENST00000402326 552 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 AIMP1P2-201ENST00000425294 312 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 AC006946.1-201ENST00000429106 328 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 AL161788.1-201ENST00000441805 169 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 RPS3AP12-201ENST00000443616 753 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 RNU6-1208P-201ENST00000459588 107 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 AC087884.1-201ENST00000469738 328 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 AC091885.1-201ENST00000506658 268 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 RNU6-377P-201ENST00000515965 102 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 RNU6-1088P-201ENST00000516850 104 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 SNORA70.24-201ENST00000517233 118 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 IMMP1LP2-201ENST00000552954 492 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 AC093249.1-201ENST00000567049 203 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 BNIP3P16-201ENST00000589779 534 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 AC044792.1-201ENST00000593294 196 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 AC007792.1-201ENST00000623023 402 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
RFT1Q96AA3 AC005336.3-201ENST00000623833 2679 ntBASIC2.2□□□□□ -2.06
RFT1Q96AA3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFT1Q96AA3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFT1Q96AA3 Y_RNA.67-201ENST00000362870 100 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 RNU6-527P-201ENST00000363425 104 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 RNU6-336P-201ENST00000364891 107 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RFT1Q96AA3 SNORA9-201ENST00000384215 133 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 RN7SKP32-201ENST00000410167 303 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 RNU4-26P-201ENST00000410270 107 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.19□□□□□ -2.06
RFT1Q96AA3 AC105272.1-201ENST00000438604 198 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 HMGB1P18-201ENST00000438801 619 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 AC007677.1-201ENST00000445757 515 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.19□□□□□ -2.06
RFT1Q96AA3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.19□□□□□ -2.06
RFT1Q96AA3 AC007547.1-201ENST00000462177 490 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.19□□□□□ -2.06
RFT1Q96AA3 SNORA14.1-201ENST00000516113 141 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 RNA5SP282-201ENST00000516355 108 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 Y_RNA.691-201ENST00000516611 103 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 RNU6-273P-201ENST00000516937 96 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.19□□□□□ -2.06
RFT1Q96AA3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.19□□□□□ -2.06
RFT1Q96AA3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.19□□□□□ -2.06
RFT1Q96AA3 AC016727.1-205ENST00000605437 569 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 AL133255.1-201ENST00000606374 441 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 SNORD14A-201ENST00000606526 91 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFT1Q96AA3 FAM157A-202ENST00000615155 405 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 AC008121.3-201ENST00000618726 433 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 AC103705.1-201ENST00000619013 241 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 AC012640.5-201ENST00000623897 319 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 MIR1302-1-201ENST00000637932 143 ntBASIC2.19□□□□□ -2.06
RFT1Q96AA3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFT1Q96AA3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RFT1Q96AA3 Y_RNA.100-201ENST00000363141 102 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 RNA5SP387-201ENST00000364226 106 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 RNU6-1222P-201ENST00000384615 107 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 SNORA48.2-201ENST00000390926 124 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 RNA5SP219-201ENST00000390940 113 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.18□□□□□ -2.06
RFT1Q96AA3 RNU6-1304P-201ENST00000411374 106 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 AL354751.2-201ENST00000415471 210 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 RPS3AP52-201ENST00000435639 297 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 AC243964.1-201ENST00000441814 261 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 AL513328.1-201ENST00000446460 224 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 RPL39P29-201ENST00000447779 157 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.18□□□□□ -2.06
RFT1Q96AA3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.18□□□□□ -2.06
RFT1Q96AA3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.18□□□□□ -2.06
RFT1Q96AA3 RN7SKP132-201ENST00000516001 208 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 RNU6-189P-201ENST00000516120 101 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 RNU6-864P-201ENST00000516256 108 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.18□□□□□ -2.06
RFT1Q96AA3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.18□□□□□ -2.06
RFT1Q96AA3 POLR3GP2-201ENST00000588366 668 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 AC243960.4-201ENST00000600532 288 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 uc_338.5-201ENST00000611839 155 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 AC097372.5-201ENST00000623665 376 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.18□□□□□ -2.06
RFT1Q96AA3 AL365361.1-201ENST00000566942 3481 ntBASIC2.18□□□□□ -2.06
RFT1Q96AA3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RFT1Q96AA3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
RFT1Q96AA3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
RFT1Q96AA3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.17□□□□□ -2.06
RFT1Q96AA3 RNU6-212P-201ENST00000362642 104 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 RNU6-428P-201ENST00000362942 107 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms