Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MIR873-201ENST00000401120 77 ntBASIC4.66□□□□□ -1.66
HLA-CQ95604 AC093578.1-201ENST00000415219 368 ntBASIC4.66□□□□□ -1.66
HLA-CQ95604 RPL23AP52-201ENST00000439311 478 ntBASIC4.66□□□□□ -1.66
HLA-CQ95604 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-CQ95604 AP000873.1-201ENST00000463987 400 ntBASIC4.66□□□□□ -1.66
HLA-CQ95604 AC145146.1-201ENST00000496370 254 ntBASIC4.66□□□□□ -1.66
HLA-CQ95604 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-CQ95604 SNORA74D-201ENST00000516404 141 ntBASIC4.66□□□□□ -1.66
HLA-CQ95604 IFITM8P-201ENST00000522529 394 ntBASIC4.66□□□□□ -1.66
HLA-CQ95604 AL110115.1-201ENST00000614396 364 ntBASIC4.66□□□□□ -1.66
HLA-CQ95604 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-CQ95604 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-CQ95604 NEAT1-202ENST00000501122 22743 ntBASIC4.66□□□□□ -1.66
HLA-CQ95604 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-CQ95604 AF117829.1-206ENST00000621883 3802 ntBASIC4.66□□□□□ -1.66
HLA-CQ95604 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-CQ95604 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-CQ95604 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
HLA-CQ95604 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-CQ95604 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
HLA-CQ95604 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-CQ95604 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
HLA-CQ95604 Y_RNA.40-201ENST00000362645 93 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 RNA5SP119-201ENST00000362715 117 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 RNU6-529P-201ENST00000363383 104 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 RNY1P11-201ENST00000363759 113 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 RNU6-1210P-201ENST00000363775 107 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 RNU6-1082P-201ENST00000364574 107 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-CQ95604 MIR491-201ENST00000384877 84 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 SNORA40.5-201ENST00000391061 128 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 MIR1278-201ENST00000408753 81 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 RN7SKP101-201ENST00000411376 320 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 AL158147.1-201ENST00000443970 75 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 AL500522.2-201ENST00000448562 343 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-CQ95604 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-CQ95604 RNA5SP49-201ENST00000516450 115 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 AC093331.1-201ENST00000521474 169 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 MIR5685-201ENST00000579080 79 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-CQ95604 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-CQ95604 AC008079.2-201ENST00000623543 20396 ntBASIC4.65□□□□□ -1.67
HLA-CQ95604 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-CQ95604 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-CQ95604 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-CQ95604 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
HLA-CQ95604 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-CQ95604 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HLA-CQ95604 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-CQ95604 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-CQ95604 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-CQ95604 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-CQ95604 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-CQ95604 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-CQ95604 RNU6-235P-201ENST00000362644 107 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 MIR518C-201ENST00000384822 101 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 MIR548B-201ENST00000385247 97 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 MIR3065-201ENST00000390137 79 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 AL512604.1-201ENST00000404812 257 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 RNU6-383P-201ENST00000410864 94 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 RPL23AP82-202ENST00000427528 469 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 RPL23AP7-203ENST00000449021 469 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 CENPBD1P1-201ENST00000464061 469 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 RNU6-197P-201ENST00000516680 100 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 SNORA70.24-201ENST00000517233 118 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-CQ95604 AC233702.9-201ENST00000581528 203 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 MIR3936-201ENST00000584304 110 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 AC019176.2-201ENST00000611579 315 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 AC012314.7-201ENST00000619693 93 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-CQ95604 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-CQ95604 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-CQ95604 AC069528.2-201ENST00000624849 1991 ntBASIC4.64□□□□□ -1.67
HLA-CQ95604 CPHL1P-201ENST00000461341 3407 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
HLA-CQ95604 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-CQ95604 MTND5P32-201ENST00000560711 1802 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HLA-CQ95604 AL672296.1-201ENST00000427780 2158 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-CQ95604 RNU6-674P-201ENST00000363831 107 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 RNU6-1279P-201ENST00000383917 103 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 SNORA20B-201ENST00000384220 132 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-CQ95604 AC117454.1-201ENST00000491120 168 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 RN7SL691P-201ENST00000494487 301 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 AC006445.2-201ENST00000510061 472 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 RNU6-168P-201ENST00000516189 101 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-CQ95604 HMGN2P15-201ENST00000585707 270 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 AL606490.9-201ENST00000603331 271 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 AC079587.1-201ENST00000603846 277 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 AL137843.1-201ENST00000605078 385 ntBASIC4.63□□□□□ -1.67
HLA-CQ95604 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HLA-CQ95604 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HLA-CQ95604 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms