Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MIR3136-201ENST00000583498 78 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 AL034555.1-201ENST00000604816 211 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 AL359821.1-201ENST00000605519 182 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 AC009878.1-201ENST00000621819 340 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 AC068205.3-201ENST00000636385 468 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 SNORA7.1-201ENST00000363750 139 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 RNU6-26P-201ENST00000383985 107 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 RNU6-641P-201ENST00000384006 107 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AC004965.1-201ENST00000413033 213 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 RPL21P111-201ENST00000418453 477 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 EBAG9P1-201ENST00000418955 543 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 ELOCP4-201ENST00000420090 333 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AC000111.3-201ENST00000433478 193 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AC005741.1-201ENST00000511094 432 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 MTND3P5-201ENST00000512798 333 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 TRMT112P2-201ENST00000512910 132 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 RNU7-40P-201ENST00000516397 64 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 MIR5094-201ENST00000578766 85 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 MTCO2P2-201ENST00000591258 225 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AL391834.2-201ENST00000609982 546 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AL157834.3-201ENST00000615543 103 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AL359740.1-201ENST00000624340 592 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AC120349.3-201ENST00000624377 529 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AC019226.2-201ENST00000625973 424 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AC099654.13-201ENST00000639774 207 ntBASIC1.14□□□□□ -2.23
CLHC1Q8NHS4 AC100821.1-201ENST00000523153 2479 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 RNU6-527P-201ENST00000363425 104 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 SNORA70.7-201ENST00000384159 133 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 RNU6-360P-201ENST00000390944 104 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 RPL23AP32-201ENST00000395315 459 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 MTCYBP2-201ENST00000407745 171 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 RNA5SP111-201ENST00000411386 101 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 SSR1P2-201ENST00000415208 787 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AL512286.1-201ENST00000439244 400 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AC243964.1-201ENST00000441814 261 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 RPL9P9-202ENST00000466501 579 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AC145146.1-201ENST00000496370 254 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AC022616.3-201ENST00000523940 148 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AC084364.2-201ENST00000546924 395 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AC008751.2-201ENST00000597885 980 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AC104073.3-201ENST00000610942 955 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 AC138649.3-201ENST00000622154 254 ntBASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.13□□□□□ -2.23
CLHC1Q8NHS4 RNU6-179P-201ENST00000363350 107 ntBASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 Y_RNA.255-201ENST00000364581 97 ntBASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 AC098592.1-201ENST00000419352 333 ntBASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 ART2BP-201ENST00000453501 499 ntBASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 AC093852.1-201ENST00000503587 266 ntBASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 AC104136.1-201ENST00000512969 394 ntBASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 MIR449C-201ENST00000516047 92 ntBASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 AC019176.1-201ENST00000518519 225 ntBASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 HMGN1P30-201ENST00000589286 268 ntBASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 AC022306.3-201ENST00000619930 550 ntBASIC1.12□□□□□ -2.23
CLHC1Q8NHS4 RNU6-1141P-201ENST00000364520 107 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 SNORA12-201ENST00000391162 147 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 RNU6-321P-201ENST00000410912 106 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 MTATP6P16-201ENST00000434543 526 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 RNA5SP269-201ENST00000459032 137 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 AC097473.1-201ENST00000508142 408 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 AF131216.2-201ENST00000512316 564 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 AC074344.1-201ENST00000512823 224 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 Y_RNA.672-201ENST00000516289 104 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 AC022878.1-201ENST00000530684 149 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 AC087883.1-201ENST00000551882 391 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 HMGB1P33-201ENST00000563485 527 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 BNIP3P16-201ENST00000589779 534 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 VN1R107P-201ENST00000601784 209 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 AC073413.2-201ENST00000604332 360 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 SNORD98-201ENST00000636377 67 ntBASIC1.11□□□□□ -2.23
CLHC1Q8NHS4 RNA5SP327-201ENST00000362494 101 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms