Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 MZT1P2-201ENST00000604387 248 ntBASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 AL034555.1-201ENST00000604816 211 ntBASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 AC090578.1-201ENST00000604955 591 ntBASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 AL139418.1-201ENST00000613613 177 ntBASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 AP000484.1-201ENST00000620067 1252 ntBASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 AL133216.2-202ENST00000634512 349 ntBASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 MTND5P35-201ENST00000557537 1720 ntBASIC0.72□□□□□ -2.29
ZNF439Q8NDP4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 RNU6-371P-201ENST00000364283 108 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 RNU1-36P-201ENST00000365130 165 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 RNU5E-7P-201ENST00000365290 117 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 RNU6-142P-201ENST00000384019 107 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 MIR544A-201ENST00000384855 91 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 MIR222-201ENST00000384992 110 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 POLR2J4-204ENST00000418424 324 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 CALM2P2-201ENST00000428512 440 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 MTCYBP39-201ENST00000437562 491 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 RPL22P17-201ENST00000438729 315 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 HMGN2P9-201ENST00000476875 229 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AC145146.1-201ENST00000496370 254 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AC104806.1-201ENST00000508720 308 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 ATP5EP1-201ENST00000510257 156 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AC079140.3-201ENST00000511111 550 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 MTND3P5-201ENST00000512798 333 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 RNU1-86P-201ENST00000516108 154 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 RNU6-123P-201ENST00000516163 102 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 RNU1-107P-201ENST00000516617 154 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 SNORA31.16-201ENST00000516773 139 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 MTND2P7-201ENST00000521337 640 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AL512310.8-201ENST00000550183 120 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 MIR5692A1-201ENST00000580523 69 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 MIR4661-201ENST00000582720 75 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 MIR3136-201ENST00000583498 78 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 BNIP3P40-201ENST00000596017 556 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AL590229.1-201ENST00000603497 542 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AL391646.1-201ENST00000603860 190 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 FAM71BP1-201ENST00000604431 523 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AC069114.2-201ENST00000604699 304 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AC211469.2-201ENST00000605461 205 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 AC004808.1-201ENST00000627671 721 ntBASIC0.71□□□□□ -2.3
ZNF439Q8NDP4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 AC010615.1-201ENST00000594254 1764 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 RNU6-527P-201ENST00000363425 104 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 SNORD114-27-201ENST00000363766 70 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 SNORA63D-201ENST00000364359 132 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 Y_RNA.302-201ENST00000364997 102 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 MIR194-1-201ENST00000384892 85 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 MTCO3P41-201ENST00000414801 328 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 AC114491.1-201ENST00000416095 246 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 AL031313.1-201ENST00000448435 256 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 HSPE1P13-201ENST00000451143 297 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 MTCO2P29-201ENST00000465212 189 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 AL163195.1-201ENST00000496941 348 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 RNA5SP337-201ENST00000517007 109 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 CBX3P8-201ENST00000532412 525 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 AL365434.2-201ENST00000607979 234 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 MIR6767-201ENST00000637302 66 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 AC245060.5-201ENST00000610778 3293 ntBASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
ZNF439Q8NDP4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 SNORA12.2-201ENST00000391040 156 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 SNORD115.1-201ENST00000391109 76 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 RNU2-7P-201ENST00000410794 178 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 RNU6-1245P-201ENST00000411130 106 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 CYCSP33-201ENST00000414485 327 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 MTCO2P21-201ENST00000419780 677 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 RPL37P21-201ENST00000435890 276 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 SNRPEP8-201ENST00000442866 260 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 MTCO3P28-201ENST00000513351 515 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 AC116347.2-201ENST00000514912 523 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 AC008088.1-201ENST00000580993 280 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms