Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AC090517.2-201ENST00000614966 680 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC009487.4-201ENST00000624969 3585 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2□□□□□ -2.09
CCDC197Q8NCU1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
CCDC197Q8NCU1 AC131280.1-202ENST00000624067 4211 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 RNU4-15P-201ENST00000362613 141 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 RNU1-91P-201ENST00000364746 163 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 RNU4-12P-201ENST00000365233 139 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 MIR17-201ENST00000385012 84 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 SNORA46.1-201ENST00000391069 153 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 RNU4-26P-201ENST00000410270 107 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 Y_RNA.615-201ENST00000410769 117 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 RNU2-32P-201ENST00000411193 191 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2□□□□□ -2.09
CCDC197Q8NCU1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2□□□□□ -2.09
CCDC197Q8NCU1 RNU7-66P-201ENST00000459469 62 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 RNU6-1037P-201ENST00000459571 107 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 S100A11P2-201ENST00000467589 312 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 AC008628.2-201ENST00000502605 298 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2□□□□□ -2.09
CCDC197Q8NCU1 HSPE1P4-201ENST00000550617 308 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 TRAV32-201ENST00000553993 340 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 CTHRC1P1-201ENST00000605383 469 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 AC022202.1-201ENST00000613515 211 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 AL450472.1-202ENST00000637286 180 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 AC024614.3-201ENST00000637860 256 ntBASIC2□□□□□ -2.09
CCDC197Q8NCU1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2□□□□□ -2.09
CCDC197Q8NCU1 MTND4P23-201ENST00000447723 1363 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 Y_RNA.89-201ENST00000363031 102 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 RNU6-254P-201ENST00000363377 107 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 RNU6-534P-201ENST00000364877 106 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 RNU6-546P-201ENST00000383991 107 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 RNU6-142P-201ENST00000384019 107 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 RNU6-1106P-201ENST00000390845 107 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 MIR548F1-201ENST00000408667 84 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 AC063976.3-201ENST00000426849 329 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 RPL32P28-201ENST00000443577 397 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 RPS29P27-201ENST00000463711 170 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 AC092436.3-201ENST00000511788 257 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 RNU6-667P-201ENST00000517186 102 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 AC022616.8-201ENST00000533569 253 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 SCOCP1-201ENST00000554676 349 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 MIR3126-201ENST00000577443 74 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 MIR1254-2-201ENST00000579553 63 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 AC100830.2-201ENST00000581636 240 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 AL160281.1-201ENST00000605307 311 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 AL132822.1-201ENST00000617063 513 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 SNORA43.4-201ENST00000629559 138 ntBASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC197Q8NCU1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AC092268.1-201ENST00000342691 405 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 RNU6-525P-201ENST00000363685 104 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 NDUFB4P4-201ENST00000404822 243 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 Y_RNA.597-201ENST00000410463 100 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AL590135.1-201ENST00000422215 156 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AC019205.3-201ENST00000424573 156 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 UBE2V1P4-201ENST00000425374 344 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AC027124.2-201ENST00000428249 105 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 NDUFA5P4-201ENST00000436704 385 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 IFNA20P-201ENST00000436840 528 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AC016700.2-201ENST00000446011 156 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 RPS29P25-201ENST00000481709 171 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AC015911.1-201ENST00000495111 156 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AC016632.1-201ENST00000503994 196 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 RNA5SP148-201ENST00000516527 94 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 RNU6-1332P-201ENST00000516666 104 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 RNA5SP137-201ENST00000516833 135 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 RNU6-612P-201ENST00000516909 102 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 SNORA31.25-201ENST00000517242 134 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AL078605.1-201ENST00000603529 500 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AC063943.3-201ENST00000615562 356 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 MIR6817-201ENST00000615588 66 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 AL137790.1-201ENST00000634283 177 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 MIR3688-2-201ENST00000636963 87 ntBASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC197Q8NCU1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 Y_RNA.6-201ENST00000362350 114 ntBASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 Y_RNA.373-201ENST00000365600 103 ntBASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 RNU6-214P-201ENST00000384130 107 ntBASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 MIR196B-201ENST00000384852 84 ntBASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 RNU6-332P-201ENST00000391193 108 ntBASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 MIR450B-201ENST00000401182 78 ntBASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 RNA5SP270-201ENST00000411361 118 ntBASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 CBX3P6-201ENST00000430257 527 ntBASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms