Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 Y_RNA.653-201ENST00000459091 95 ntBASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 Y_RNA.632-201ENST00000459189 102 ntBASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 AC080013.2-201ENST00000460866 323 ntBASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 AC091826.1-201ENST00000514065 313 ntBASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 RNU2-53P-201ENST00000516257 147 ntBASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 MIR4513-201ENST00000581077 86 ntBASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 7SK.7-201ENST00000603504 247 ntBASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 AL359198.2-201ENST00000611836 194 ntBASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 AL669831.3-213ENST00000636676 183 ntBASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 MTND5P9-201ENST00000503854 1755 ntBASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 AL035425.3-201ENST00000564206 4996 ntBASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRPF38AQ8NAV1 AC096644.4-201ENST00000563417 2912 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 RNU1-72P-201ENST00000362976 153 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 U3.13-201ENST00000364804 214 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 RNA5SP274-201ENST00000410484 108 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 AC008267.5-201ENST00000424928 265 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 AL513124.1-201ENST00000450410 614 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 AL121594.1-201ENST00000475906 575 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 Y_RNA.670-201ENST00000516255 105 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 AC007536.1-201ENST00000533382 349 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 APOOP3-201ENST00000536787 586 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 AC093027.1-201ENST00000546698 429 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 GTF3AP2-201ENST00000557014 266 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 AL670379.2-201ENST00000604983 252 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 AL449363.1-201ENST00000617815 186 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 AC126177.8-201ENST00000618339 1015 ntBASIC3.41□□□□□ -1.86
PRPF38AQ8NAV1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PRPF38AQ8NAV1 MTND4P29-201ENST00000503122 1372 ntBASIC3.4□□□□□ -1.86
PRPF38AQ8NAV1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PRPF38AQ8NAV1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PRPF38AQ8NAV1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PRPF38AQ8NAV1 RNU4-79P-201ENST00000362764 141 ntBASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 RNU6-968P-201ENST00000384076 107 ntBASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 SNORA26.3-201ENST00000391119 136 ntBASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 CBX3P9-201ENST00000402326 552 ntBASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 AL031121.1-201ENST00000406553 254 ntBASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 RN7SKP58-201ENST00000411010 305 ntBASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 BMS1P22-201ENST00000414726 313 ntBASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 SNORD19B-201ENST00000459623 84 ntBASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 AC009318.2-201ENST00000610917 651 ntBASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PRPF38AQ8NAV1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AL355596.1-201ENST00000565399 3996 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 Y_RNA.11-201ENST00000362375 109 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 RNU6-1286P-201ENST00000383871 107 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 RNU6-842P-201ENST00000384269 107 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 Y_RNA.490-201ENST00000384413 102 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 RNY4P36-201ENST00000391116 96 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AL139281.1-201ENST00000422120 335 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AL590135.1-201ENST00000422215 156 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC019205.3-201ENST00000424573 156 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC016700.2-201ENST00000446011 156 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC073901.1-201ENST00000462471 408 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC140059.1-201ENST00000489238 361 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC015911.1-201ENST00000495111 156 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 RNA5SP356-201ENST00000515972 94 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC060766.3-201ENST00000591442 263 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC069234.5-201ENST00000611056 416 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC137590.2-201ENST00000619709 240 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 AC233981.2-201ENST00000611524 1614 ntBASIC3.39□□□□□ -1.87
PRPF38AQ8NAV1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 RNU6-1059P-201ENST00000363752 98 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 Y_RNA.315-201ENST00000365117 102 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 SNORA9.2-201ENST00000365361 133 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 U8.9-201ENST00000365667 134 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 SNORA46-201ENST00000384762 135 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 AIMP1P2-201ENST00000425294 312 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 AC105272.1-201ENST00000438604 198 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 AC091874.1-201ENST00000511402 339 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 Y_RNA.718-201ENST00000517110 102 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 MIR5571-201ENST00000577998 113 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 RPL30P11-203ENST00000598995 310 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 RPL12P50-201ENST00000603116 116 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms