Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC011352.1-201ENST00000512300 793 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNA5SP148-201ENST00000516527 94 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNU2-44P-201ENST00000516795 194 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNA5SP364-201ENST00000516938 78 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-586P-201ENST00000517265 104 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AP000763.2-201ENST00000540641 163 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC146944.4-201ENST00000602697 718 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RMST_3.1-201ENST00000611651 109 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 MIR3688-2-201ENST00000636963 87 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AP000553.5-201ENST00000641933 54 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC062016.1-201ENST00000355719 319 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-1252P-201ENST00000363054 104 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-522P-201ENST00000364497 107 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 Y_RNA.256-201ENST00000364594 104 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-534P-201ENST00000364877 106 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-1274P-201ENST00000384557 107 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 Y_RNA.573-201ENST00000384763 105 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 MRPS10P2-201ENST00000431226 381 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC007969.2-201ENST00000441891 191 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AL353752.1-201ENST00000454946 260 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AL049873.1-201ENST00000480540 376 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC018868.1-201ENST00000491307 315 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-1069P-201ENST00000516612 133 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 MIR4319-201ENST00000577285 85 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 MIR3126-201ENST00000577443 74 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 MIR5692C1-201ENST00000585309 91 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AP000907.4-201ENST00000604143 237 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC005034.5-201ENST00000604219 466 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AL670379.2-201ENST00000604983 252 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC063943.3-201ENST00000615562 356 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC008121.3-201ENST00000618726 433 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 uc_338.20-201ENST00000621563 178 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 DUXAP9-208ENST00000622815 614 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC007792.1-201ENST00000623023 402 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC006386.2-201ENST00000624491 75 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC012005.1-201ENST00000624575 75 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 CTSLP2-204ENST00000629029 392 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 MIR3662-201ENST00000637030 95 ntBASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC71LQ8N9Z2 AC008555.8-201ENST00000623602 2168 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 Y_RNA.167-201ENST00000363735 109 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 SNORA80A-201ENST00000363922 136 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 SNORA25B-201ENST00000365507 128 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-692P-201ENST00000384496 107 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 MIR561-201ENST00000385216 97 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 EIF4E2P1-201ENST00000393781 255 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 Y_RNA.599-201ENST00000410489 109 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AL117339.3-201ENST00000418733 162 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 EIF1P1-201ENST00000421436 341 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AC243964.1-201ENST00000441814 261 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 HMGN2P26-201ENST00000463169 339 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AP001486.1-201ENST00000463339 476 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 RPL23AP42-201ENST00000471152 471 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 Y_RNA.665-201ENST00000516177 98 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-1332P-201ENST00000516666 104 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AC087854.1-201ENST00000519706 414 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AC104576.1-201ENST00000524225 88 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AC233702.2-202ENST00000562547 291 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 MIR5002-201ENST00000584713 97 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 BNIP3P25-201ENST00000596023 559 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AL109918.3-201ENST00000603072 338 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 ELOCP5-201ENST00000604924 333 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 CTHRC1P1-201ENST00000605383 469 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AC084782.3-201ENST00000612282 578 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 U4atac.1-201ENST00000618345 95 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 AC241585.2-209ENST00000638217 143 ntBASIC1.76□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-1210P-201ENST00000363775 107 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 SNORA5B-201ENST00000363786 132 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 RNA5SP160-201ENST00000364866 120 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 Y_RNA.505-201ENST00000384489 102 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-1106P-201ENST00000390845 107 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 SNORA11.2-201ENST00000408318 127 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms