Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ARHGEF39Q8N4T4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.55□□□□□ -1.84
ARHGEF39Q8N4T4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
ARHGEF39Q8N4T4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
ARHGEF39Q8N4T4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ARHGEF39Q8N4T4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.55□□□□□ -1.84
ARHGEF39Q8N4T4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 SNORA25.1-201ENST00000362326 128 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 Y_RNA.29-201ENST00000362570 113 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 Y_RNA.200-201ENST00000364018 102 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 Y_RNA.297-201ENST00000364950 91 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 RNU6-514P-201ENST00000384208 107 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 MIR554-201ENST00000384874 96 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 RNA5SP424-201ENST00000390988 115 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AL512633.1-201ENST00000399931 655 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AC017079.2-201ENST00000416102 485 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AC007395.1-201ENST00000451333 677 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 SNORA84-201ENST00000459229 133 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AC074133.1-201ENST00000515696 183 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AC023632.4-201ENST00000517783 191 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 RRN3P3-201ENST00000549207 578 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AC233702.2-202ENST00000562547 291 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 MIR4644-201ENST00000579929 84 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AC008749.1-201ENST00000597650 306 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 MZT1P2-201ENST00000604387 248 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AL137843.1-201ENST00000605078 385 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AL357075.2-201ENST00000614906 189 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AL391261.4-201ENST00000616012 481 ntBASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.54□□□□□ -1.84
ARHGEF39Q8N4T4 AC099654.7-201ENST00000635788 2127 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 RNU1-105P-201ENST00000363470 161 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 RNA5SP51-201ENST00000364750 119 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 Y_RNA.331-201ENST00000365267 102 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 RNU6-378P-201ENST00000384324 107 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 RNU1-89P-201ENST00000384592 164 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 PIGPP3-201ENST00000425307 415 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 AL138752.1-201ENST00000452964 351 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 PRELID3BP1-201ENST00000457142 540 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 snoU13.14-201ENST00000459372 104 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 RNU6-625P-201ENST00000459412 107 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 AP001324.2-201ENST00000461163 319 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 RNU1-95P-201ENST00000516357 160 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 RNU1-128P-201ENST00000516704 160 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 AC022080.3-201ENST00000544433 482 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 AC020914.4-201ENST00000597690 277 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 AC012531.5-201ENST00000611375 151 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 MIR486-1-201ENST00000612171 68 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
ARHGEF39Q8N4T4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 RNU6-799P-201ENST00000363567 107 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 RNA5SP322-201ENST00000363617 119 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 SNORA5A-201ENST00000384111 134 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 SNORA18.3-201ENST00000384122 132 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 MIR1298-201ENST00000408783 112 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 NDUFB4P10-201ENST00000452541 359 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 AC112771.1-201ENST00000463581 102 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 AC103975.1-201ENST00000482506 483 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 RPL36AP48-201ENST00000485521 314 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 RPL7P47-201ENST00000497299 556 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 AC018448.1-201ENST00000552843 316 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 MIR4643-201ENST00000577473 78 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 MIR4444-1-201ENST00000581696 74 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 MIR4444-2-201ENST00000584390 74 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 AC006133.1-201ENST00000617106 264 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 CR392039.5-201ENST00000623201 510 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 AC135776.4-201ENST00000624300 1904 ntBASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.52□□□□□ -1.85
ARHGEF39Q8N4T4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ARHGEF39Q8N4T4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ARHGEF39Q8N4T4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms