Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC025445.1-201ENST00000502728 300 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 AC006499.6-201ENST00000511169 607 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 RNU7-121P-201ENST00000516604 62 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 RNA5SP73-201ENST00000516744 108 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 TOMM20P2-201ENST00000540082 421 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 AC069240.1-201ENST00000548774 375 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 MIR5699-201ENST00000578903 90 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 MIR4744-201ENST00000581563 82 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 AL391358.1-201ENST00000605342 190 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 AL138721.1-201ENST00000616756 179 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 Y_RNA.778-201ENST00000620203 90 ntBASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.24□□□□□ -1.73
DEPDC4Q8N2C3 AC134026.1-201ENST00000623249 2239 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 RNA5SP295-201ENST00000362655 121 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 Y_RNA.215-201ENST00000364204 112 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 RNU6-959P-201ENST00000384671 107 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 RPL23AP48-201ENST00000406913 488 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 RNA5SP113-201ENST00000410486 84 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 RNA5SP39-201ENST00000411245 120 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 RPL23AP62-201ENST00000463396 453 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 IGLV2-34-201ENST00000490007 283 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 RNU6-479P-201ENST00000516348 105 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 HSPE1P18-201ENST00000517602 280 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 AC021269.2-201ENST00000532318 330 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 MIR4431-201ENST00000579990 94 ntBASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DEPDC4Q8N2C3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 RNU1-105P-201ENST00000363470 161 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 SNORD32B-201ENST00000364460 84 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 SNORD50B-201ENST00000364995 70 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 RNU6-376P-201ENST00000384731 106 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 MIR29B2-201ENST00000385055 81 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 MIR526A2-201ENST00000390198 65 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 RNU6-131P-201ENST00000391144 107 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 RNU2-51P-201ENST00000410708 197 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 RNA5SP104-201ENST00000410989 118 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 CR769767.1-201ENST00000436337 346 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 RNU6-62P-201ENST00000516526 102 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 IGLV3-26-201ENST00000520756 302 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 AC133555.2-201ENST00000550213 292 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 AC022726.1-201ENST00000587475 207 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 FAM27B-201ENST00000610601 213 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 AC083809.1-201ENST00000615051 472 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 MFSD8-216ENST00000641147 4009 ntBASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DEPDC4Q8N2C3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
DEPDC4Q8N2C3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.73
DEPDC4Q8N2C3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 snoU2_19.1-201ENST00000362361 80 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 Y_RNA.310-201ENST00000365063 113 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 Y_RNA.341-201ENST00000365341 102 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 RNU6-578P-201ENST00000390980 103 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 AC097463.2-201ENST00000421074 142 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 YME1L1P1-201ENST00000429435 297 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 AL445584.1-201ENST00000431451 330 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 SNRPGP3-201ENST00000469405 227 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 AC069294.1-201ENST00000608397 350 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 Y_RNA.802-201ENST00000614892 130 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 MIR6780A-201ENST00000615089 68 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 AL159152.1-201ENST00000635019 2587 ntBASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
DEPDC4Q8N2C3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms