Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 MTCO1P27-201ENST00000448269 226 ntBASIC0.72□□□□□ -2.29
ARHGEF28Q8N1W1 snoU109.2-201ENST00000459316 135 ntBASIC0.72□□□□□ -2.29
ARHGEF28Q8N1W1 AC113347.3-201ENST00000509113 148 ntBASIC0.72□□□□□ -2.29
ARHGEF28Q8N1W1 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.72□□□□□ -2.29
ARHGEF28Q8N1W1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.72□□□□□ -2.29
ARHGEF28Q8N1W1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.72□□□□□ -2.29
ARHGEF28Q8N1W1 MIR15A-201ENST00000607334 83 ntBASIC0.72□□□□□ -2.29
ARHGEF28Q8N1W1 AC130324.3-201ENST00000614165 542 ntBASIC0.72□□□□□ -2.29
ARHGEF28Q8N1W1 MIR412-201ENST00000362142 91 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 Y_RNA.33-201ENST00000362591 102 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 RNU6-212P-201ENST00000362642 104 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 SMIM11P1-201ENST00000369586 178 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 RNU6-26P-201ENST00000383985 107 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 RNU6-968P-201ENST00000384076 107 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 Y_RNA.534-201ENST00000384599 112 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 FCF1P10-201ENST00000407590 479 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 AL139824.2-201ENST00000458731 1095 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 MTCO3P27-201ENST00000514397 196 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 AL356057.1-201ENST00000533798 831 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 HMGB1P33-201ENST00000563485 527 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 MIR5589-201ENST00000579442 60 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 NIFKP6-201ENST00000598115 845 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 AL353778.1-201ENST00000603149 408 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 AP000860.1-201ENST00000605250 559 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 AL590240.4-201ENST00000616908 390 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 AL391516.1-201ENST00000554380 2449 ntBASIC0.71□□□□□ -2.3
ARHGEF28Q8N1W1 RNU5A-8P-201ENST00000364102 114 ntBASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 MIR329-2-201ENST00000385029 84 ntBASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 RNU4-22P-201ENST00000411058 166 ntBASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 AP000542.1-201ENST00000448473 371 ntBASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 AC079395.1-201ENST00000510981 262 ntBASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 AC079140.3-201ENST00000511111 550 ntBASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 Y_RNA.689-201ENST00000516589 107 ntBASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 RNU6-677P-201ENST00000516914 101 ntBASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 MIR4514-201ENST00000581410 57 ntBASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 BNIP3P31-201ENST00000604515 566 ntBASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
ARHGEF28Q8N1W1 RNU1-124P-201ENST00000363861 145 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 Y_RNA.332-201ENST00000365271 113 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 RNU6-224P-201ENST00000384055 107 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 SNORA29-201ENST00000384183 140 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AL589872.1-201ENST00000426602 288 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 C8orf59P1-201ENST00000429930 303 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 MTND2P4-201ENST00000445034 1004 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 RNU1-131P-201ENST00000458943 161 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 SNORD116-28-201ENST00000516123 91 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AC009712.1-201ENST00000564938 316 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AL158163.2-201ENST00000619110 700 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AC012676.2-201ENST00000619258 186 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AP000943.4-201ENST00000622912 357 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 SNORA63.3-201ENST00000362682 132 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 RNU6-72P-201ENST00000384285 79 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 MIR520A-201ENST00000384862 85 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 MIR515-2-201ENST00000384883 83 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 MIR515-1-201ENST00000384884 83 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 MTCYBP5-201ENST00000423752 1135 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AC013262.1-201ENST00000426710 252 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 HSPE1P9-201ENST00000440046 311 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 NDUFB1P2-201ENST00000449477 176 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 HMGN2P9-201ENST00000476875 229 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 RNU5A-4P-201ENST00000516588 111 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 MZT1P2-201ENST00000604387 248 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AL022154.1-201ENST00000604698 785 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AL355816.2-201ENST00000610049 647 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 AC009033.1-201ENST00000624279 431 ntBASIC0.69□□□□□ -2.3
ARHGEF28Q8N1W1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 RNU6-462P-201ENST00000362659 105 ntBASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 ELOCP17-201ENST00000414751 326 ntBASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 ELOCP9-201ENST00000418624 239 ntBASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 HSPE1P13-201ENST00000451143 297 ntBASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 RNU6-914P-201ENST00000516749 109 ntBASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 AC025678.1-201ENST00000567861 338 ntBASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 VN1R82P-201ENST00000601481 356 ntBASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 AC078795.2-201ENST00000602835 1252 ntBASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 MTATP6P2-201ENST00000603319 678 ntBASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 AC007363.1-201ENST00000604736 620 ntBASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
ARHGEF28Q8N1W1 RNA5SP299-201ENST00000391203 116 ntBASIC0.67□□□□□ -2.3
ARHGEF28Q8N1W1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.67□□□□□ -2.3
ARHGEF28Q8N1W1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.67□□□□□ -2.3
ARHGEF28Q8N1W1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.67□□□□□ -2.3
ARHGEF28Q8N1W1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms