Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 HIGD1AP1-201ENST00000550979 275 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.19□□□□□ -1.9
VRK3Q8IV63 AC010620.2-201ENST00000600135 313 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 AC024153.1-201ENST00000603103 365 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 AC024220.1-201ENST00000603675 484 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 AP002826.1-201ENST00000608835 315 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 RMST_6.1-201ENST00000611980 203 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 AC011476.5-201ENST00000615594 130 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
VRK3Q8IV63 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.19□□□□□ -1.9
VRK3Q8IV63 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VRK3Q8IV63 AF117829.1-206ENST00000621883 3802 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 AL353746.1-201ENST00000566293 6881 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
VRK3Q8IV63 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 RNU4-90P-201ENST00000362773 141 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 RNA5SP167-201ENST00000365461 116 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 RNU6-326P-201ENST00000365480 107 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 RNU6-318P-201ENST00000384283 103 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 Y_RNA.504-201ENST00000384481 104 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 Y_RNA.506-201ENST00000384494 102 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VRK3Q8IV63 AC007919.1-201ENST00000429380 217 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 CYCSP32-201ENST00000440548 321 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 PIGFP3-201ENST00000441918 722 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 AC006539.3-201ENST00000454258 129 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 snoU109.2-201ENST00000459316 135 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 TOMM22P6-201ENST00000465035 409 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 RPL7P49-201ENST00000471402 708 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 RPL30P1-201ENST00000488676 339 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 SEPT14P8-201ENST00000508026 178 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 SNORA43.2-201ENST00000516652 128 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 RNA5SP291-201ENST00000517222 105 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.18□□□□□ -1.9
VRK3Q8IV63 MIR2682-201ENST00000580305 110 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 MIR4423-201ENST00000580922 80 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 AC099506.2-201ENST00000623074 221 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 AC233981.2-201ENST00000611524 1614 ntBASIC3.18□□□□□ -1.9
VRK3Q8IV63 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VRK3Q8IV63 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
VRK3Q8IV63 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VRK3Q8IV63 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VRK3Q8IV63 RNU1-139P-201ENST00000391307 165 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 AC092047.1-201ENST00000424997 240 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 SNRPEP9-201ENST00000436794 238 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 AC009296.1-201ENST00000443146 155 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 AP000873.1-201ENST00000463987 400 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 SNRPGP3-201ENST00000469405 227 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.17□□□□□ -1.9
VRK3Q8IV63 SNORA25.14-201ENST00000516481 132 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 AP002392.1-201ENST00000537692 208 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 CYCSP39-201ENST00000565821 309 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.17□□□□□ -1.9
VRK3Q8IV63 MIR7112-201ENST00000616126 65 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 AC084757.4-201ENST00000616350 526 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 AC097372.5-201ENST00000623665 376 ntBASIC3.17□□□□□ -1.9
VRK3Q8IV63 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
VRK3Q8IV63 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VRK3Q8IV63 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VRK3Q8IV63 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VRK3Q8IV63 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.16□□□□□ -1.9
VRK3Q8IV63 RNU6-222P-201ENST00000362438 107 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VRK3Q8IV63 Z98749.2-208ENST00000381646 500 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 RNU6-1286P-201ENST00000383871 107 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
VRK3Q8IV63 U3.37-201ENST00000408528 213 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 RNA5SP120-201ENST00000410900 112 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 Y_RNA.626-201ENST00000411288 95 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 AL031659.1-201ENST00000447075 539 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.16□□□□□ -1.9
VRK3Q8IV63 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 MIR4282-201ENST00000583613 67 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 Z83818.1-201ENST00000603584 150 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 AC011921.3-201ENST00000605540 361 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.16□□□□□ -1.9
VRK3Q8IV63 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 AC241585.2-209ENST00000638217 143 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 AC132825.6-201ENST00000638861 357 ntBASIC3.16□□□□□ -1.9
VRK3Q8IV63 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VRK3Q8IV63 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VRK3Q8IV63 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.15□□□□□ -1.9
VRK3Q8IV63 RNU1-75P-201ENST00000347264 129 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VRK3Q8IV63 Y_RNA.44-201ENST00000362676 108 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 RNU6-942P-201ENST00000363002 107 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 RNA5SP72-201ENST00000364442 117 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 MIR518D-201ENST00000385014 87 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 RPS4XP3-201ENST00000398541 413 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 AL033519.2-201ENST00000403958 392 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 MTATP6P29-201ENST00000415057 132 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.15□□□□□ -1.91
VRK3Q8IV63 COX6CP10-201ENST00000416832 224 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 AL590383.1-201ENST00000428602 75 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms