Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNU6-562P-201ENST00000362731 107 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 Y_RNA.135-201ENST00000363439 95 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 RNU6-1032P-201ENST00000384100 107 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 RNU6-933P-201ENST00000384424 107 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 RNU6-831P-201ENST00000384548 107 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 RNU6-510P-201ENST00000391239 108 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 AL356776.1-201ENST00000406574 447 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.37□□□□□ -2.03
LDB1Q86U70 AL133396.1-201ENST00000432048 687 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.37□□□□□ -2.03
LDB1Q86U70 MTND4LP16-201ENST00000440828 295 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.37□□□□□ -2.03
LDB1Q86U70 AC016632.1-201ENST00000503994 196 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 AP000889.1-201ENST00000530968 660 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 AC021269.2-201ENST00000532318 330 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 CBX3P7-201ENST00000532876 502 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.37□□□□□ -2.03
LDB1Q86U70 MIR4658-201ENST00000584344 65 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 MIR3942-201ENST00000585264 109 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 U4atac.1-201ENST00000618345 95 ntBASIC2.37□□□□□ -2.03
LDB1Q86U70 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LDB1Q86U70 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
LDB1Q86U70 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.36□□□□□ -2.03
LDB1Q86U70 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
LDB1Q86U70 AC092268.1-201ENST00000342691 405 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 Y_RNA.212-201ENST00000364177 102 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 SNORD116-11-201ENST00000383882 92 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 MIR29B2-201ENST00000385055 81 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LDB1Q86U70 AL139413.1-201ENST00000421309 217 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.36□□□□□ -2.03
LDB1Q86U70 AL353752.1-201ENST00000454946 260 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 RPS29P27-201ENST00000463711 170 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 RPL31P58-201ENST00000469001 379 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.36□□□□□ -2.03
LDB1Q86U70 HMGB1P35-201ENST00000503360 598 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 AC018710.1-201ENST00000506509 158 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 AC010486.1-201ENST00000511793 424 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 SNORA48.11-201ENST00000517015 89 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 AP005902.1-201ENST00000521358 186 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 AC107953.1-201ENST00000522216 297 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 AC007375.1-201ENST00000554513 578 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.36□□□□□ -2.03
LDB1Q86U70 MIR4446-201ENST00000578505 67 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 CPDP1-201ENST00000579660 283 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.36□□□□□ -2.03
LDB1Q86U70 AC018889.1-201ENST00000605372 397 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 AC243829.7-201ENST00000633081 225 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 SNORD98-201ENST00000636377 67 ntBASIC2.36□□□□□ -2.03
LDB1Q86U70 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LDB1Q86U70 AC009541.1-201ENST00000438279 2662 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.35□□□□□ -2.03
LDB1Q86U70 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LDB1Q86U70 snoU2_19.1-201ENST00000362361 80 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 Y_RNA.72-201ENST00000362894 103 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LDB1Q86U70 RNU6-142P-201ENST00000384019 107 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 RNU6-95P-201ENST00000384697 107 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 AL590135.1-201ENST00000422215 156 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 AC019205.3-201ENST00000424573 156 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 MTND3P9-201ENST00000429526 346 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 USP9YP28-201ENST00000435142 589 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.35□□□□□ -2.03
LDB1Q86U70 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.35□□□□□ -2.03
LDB1Q86U70 AC016700.2-201ENST00000446011 156 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.35□□□□□ -2.03
LDB1Q86U70 RNU7-187P-201ENST00000458985 68 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.35□□□□□ -2.03
LDB1Q86U70 AC015911.1-201ENST00000495111 156 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 RNU4-49P-201ENST00000516080 140 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.35□□□□□ -2.03
LDB1Q86U70 AC087241.2-201ENST00000535801 324 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.35□□□□□ -2.03
LDB1Q86U70 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.35□□□□□ -2.03
LDB1Q86U70 AC067747.1-201ENST00000608026 250 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 AC009248.2-201ENST00000619826 254 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.35□□□□□ -2.03
LDB1Q86U70 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.35□□□□□ -2.03
LDB1Q86U70 MIR1291-201ENST00000627649 87 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.35□□□□□ -2.03
LDB1Q86U70 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LDB1Q86U70 CASC19-280ENST00000642102 1351 ntBASIC2.35□□□□□ -2.03
LDB1Q86U70 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LDB1Q86U70 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.34□□□□□ -2.03
LDB1Q86U70 RNU4-56P-201ENST00000364700 142 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 MIR561-201ENST00000385216 97 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 AL590556.1-201ENST00000423231 483 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 RPS15AP28-201ENST00000435088 386 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 IFNA20P-201ENST00000436840 528 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 MTND1P11-201ENST00000456661 876 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 AC130509.1-201ENST00000464158 433 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 AC104564.1-201ENST00000493028 407 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 AC234781.5-201ENST00000508429 271 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.34□□□□□ -2.03
LDB1Q86U70 AC091874.1-201ENST00000511402 339 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.34□□□□□ -2.03
LDB1Q86U70 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.34□□□□□ -2.03
LDB1Q86U70 AC011712.1-201ENST00000588959 234 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 AL034555.1-201ENST00000604816 211 ntBASIC2.34□□□□□ -2.03
LDB1Q86U70 AL133215.3-201ENST00000609801 448 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms