Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC108206.1-201ENST00000570186 4159 ntBASIC2.9□□□□□ -1.94
PTCHD4Q6ZW05 RNU6-142P-201ENST00000384019 107 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 SNORA29-201ENST00000384183 140 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 MIR490-201ENST00000384865 128 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 MIR147B-201ENST00000390185 80 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 MIR767-201ENST00000390228 109 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 RNU6-823P-201ENST00000391042 103 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 MIR190B-201ENST00000401119 79 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 RPL19P1-201ENST00000411635 428 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 GPM6BP3-201ENST00000442797 145 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 AC009296.1-201ENST00000443146 155 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 snoU13.30-201ENST00000458951 104 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 TOMM22P6-201ENST00000465035 409 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 AF186996.7-201ENST00000492781 209 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 RPL22P13-201ENST00000493291 347 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 SNORA40.14-201ENST00000516543 86 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 Y_RNA.706-201ENST00000516933 99 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 Y_RNA.721-201ENST00000517207 102 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 AC023632.4-201ENST00000517783 191 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 AL117187.1-201ENST00000555482 181 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 VN1R91P-201ENST00000594377 169 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 AL391813.1-201ENST00000603098 260 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 RPL23AP88-201ENST00000605759 454 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 U2.1-201ENST00000618978 145 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 AL161912.2-201ENST00000565707 3007 ntBASIC2.9□□□□□ -1.95
PTCHD4Q6ZW05 MTND5P1-201ENST00000445440 1375 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 Y_RNA.153-201ENST00000363615 91 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 SNORD14.1-201ENST00000365609 90 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 Y_RNA.557-201ENST00000384680 107 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 MIR627-201ENST00000384979 97 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 MIR548F4-201ENST00000408515 105 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 Y_RNA.592-201ENST00000410274 109 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 RN7SKP61-201ENST00000410642 295 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 HMGB3P2-201ENST00000411913 584 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 HMGN2P31-201ENST00000432430 273 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 AL441985.1-201ENST00000457727 251 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 RNU7-87P-201ENST00000459343 62 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 GZMAP1-201ENST00000503054 631 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 AC016632.1-201ENST00000503994 196 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 RN7SKP43-201ENST00000516173 320 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 RN7SKP272-201ENST00000516988 232 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 AC124312.5-201ENST00000604451 268 ntBASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PTCHD4Q6ZW05 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 U3.13-201ENST00000364804 214 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 Y_RNA.358-201ENST00000365491 99 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 SNORA36A-201ENST00000384221 132 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 MIR628-201ENST00000385229 95 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 RN7SKP123-201ENST00000410732 291 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AC138623.1-201ENST00000418060 216 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 DPH3P2-201ENST00000422618 250 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AC244670.1-201ENST00000436879 112 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 RPS12P18-201ENST00000442381 270 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 U8.20-201ENST00000459445 131 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AC008155.2-201ENST00000464337 397 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AC087477.1-201ENST00000465747 340 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AC022616.4-201ENST00000522985 181 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AC040926.1-201ENST00000530195 238 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 RPS15AP11-201ENST00000594193 385 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AL355877.2-201ENST00000603670 358 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AC016727.2-201ENST00000603988 621 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 AL359198.2-201ENST00000611836 194 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 UCA1.1-201ENST00000620952 75 ntBASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
PTCHD4Q6ZW05 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 RNU5B-2P-201ENST00000363036 113 ntBASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 Y_RNA.106-201ENST00000363189 100 ntBASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 RNU6-1285P-201ENST00000363480 105 ntBASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 Y_RNA.144-201ENST00000363521 113 ntBASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 RNU1-109P-201ENST00000383960 147 ntBASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 MIR32-201ENST00000384965 70 ntBASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 RNU2-25P-201ENST00000411041 191 ntBASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 AC078809.1-201ENST00000427601 140 ntBASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 AP001324.2-201ENST00000461163 319 ntBASIC2.87□□□□□ -1.95
PTCHD4Q6ZW05 RPL27AP5-201ENST00000469428 449 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms