Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MTND5P30-201ENST00000452896 1731 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 MIR6073-201ENST00000352083 89 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-1317P-201ENST00000364582 104 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-692P-201ENST00000384496 107 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 SNORA41-201ENST00000384675 132 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 MT-TD-201ENST00000387419 68 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 AL133396.1-201ENST00000432048 687 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 SNRPEP8-201ENST00000442866 260 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 AC124916.1-201ENST00000444020 547 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 SNORD5.1-201ENST00000458800 75 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-612P-201ENST00000516909 102 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 RNU1-104P-201ENST00000517280 175 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 RAB11AP2-201ENST00000545905 639 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 AC099654.5-201ENST00000636479 350 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 AC002543.1-201ENST00000299783 1954 ntBASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SYNE3Q6ZMZ3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-227P-201ENST00000362865 103 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-1285P-201ENST00000363480 105 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-1222P-201ENST00000384615 107 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 SNORA26.3-201ENST00000391119 136 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 AL359511.1-201ENST00000402970 211 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 RNA5SP181-201ENST00000410246 98 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 RPS3P1-201ENST00000456781 192 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 RPL9P9-202ENST00000466501 579 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 RPS27P27-201ENST00000498779 255 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 AC114801.2-201ENST00000503825 781 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 RPL39P5-202ENST00000512505 151 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-1016P-201ENST00000516689 94 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 RPS3AP23-202ENST00000574601 686 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 AC124303.1-201ENST00000605703 360 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 MIR8076-201ENST00000611401 83 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 Y_RNA.804-201ENST00000615262 101 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 AC063943.3-201ENST00000615562 356 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 AC097372.5-201ENST00000623665 376 ntBASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.86□□□□□ -1.95
SYNE3Q6ZMZ3 Y_RNA.151-201ENST00000363566 112 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-1141P-201ENST00000364520 107 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 U8.8-201ENST00000365399 135 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 Y_RNA.482-201ENST00000384377 111 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 MIR517A-201ENST00000385001 87 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 RN7SKP61-201ENST00000410642 295 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 RPL37P10-201ENST00000412884 288 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 Z82209.1-201ENST00000422141 2135 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 AC093019.1-201ENST00000443135 252 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 AL031659.1-201ENST00000447075 539 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 MTND3P22-201ENST00000510932 243 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 AP005902.1-201ENST00000521358 186 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 AC243960.4-201ENST00000600532 288 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 AC113139.1-201ENST00000605049 239 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 MIR6852-201ENST00000621699 66 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 AL359697.1-201ENST00000624879 587 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 MIR7157-201ENST00000635801 60 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 AP000560.1-201ENST00000624150 1937 ntBASIC2.85□□□□□ -1.95
SYNE3Q6ZMZ3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 SNORD114-30-201ENST00000364448 72 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 SNORA67.1-201ENST00000364749 141 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-43P-201ENST00000384302 107 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 Y_RNA.529-201ENST00000384586 119 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 MIR518C-201ENST00000384822 101 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-1140P-201ENST00000410517 106 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-1245P-201ENST00000411130 106 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 RPS15AP7-201ENST00000439294 405 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 AC026782.1-201ENST00000512952 449 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 RNA5SP112-201ENST00000515937 99 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 C8orf59P2-201ENST00000603441 271 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 AC018462.2-201ENST00000605375 395 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 AC104985.2-201ENST00000620598 500 ntBASIC2.84□□□□□ -1.95
SYNE3Q6ZMZ3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 SNORD114-19-201ENST00000363072 75 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 RNU6-486P-201ENST00000363116 107 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms