Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RPS29P20-201ENST00000489592 171 ntBASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 RNU7-116P-201ENST00000516940 62 ntBASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 AC093591.2-201ENST00000565254 3843 ntBASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 AL137843.1-201ENST00000605078 385 ntBASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 FAM27D1-201ENST00000612308 341 ntBASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 AL121772.2-201ENST00000614331 297 ntBASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCRAQ6ISU1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
PTCRAQ6ISU1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 RNU6-978P-201ENST00000364371 103 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 SNORA18.2-201ENST00000383865 132 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 RN7SKP101-201ENST00000411376 320 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 AL161651.1-201ENST00000440882 223 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 RPL39P40-201ENST00000445481 146 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 AC107626.1-201ENST00000471084 183 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 RPL36AP21-201ENST00000490372 323 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 RN7SL812P-201ENST00000493791 279 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 AC091178.2-201ENST00000584401 117 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 RPL30P11-203ENST00000598995 310 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 RPL17P51-201ENST00000605218 238 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 AC106754.2-201ENST00000623006 233 ntBASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PTCRAQ6ISU1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 RNU6-1010P-201ENST00000362757 107 ntBASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 Y_RNA.432-201ENST00000384087 111 ntBASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 MIR634-201ENST00000385208 97 ntBASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 MIR548B-201ENST00000385247 97 ntBASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 Y_RNA.587-201ENST00000391210 103 ntBASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 AL157831.1-201ENST00000426134 473 ntBASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 AL591623.2-201ENST00000449978 222 ntBASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 RPS26P45-201ENST00000471748 340 ntBASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 AL592156.1-201ENST00000508758 304 ntBASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 AC011602.1-201ENST00000546484 331 ntBASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 AL136964.1-201ENST00000622038 2990 ntBASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTCRAQ6ISU1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 MIR450A1-201ENST00000362262 91 ntBASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 RNU4-15P-201ENST00000362613 141 ntBASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 RNU6-674P-201ENST00000363831 107 ntBASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 RNU6-1164P-201ENST00000364428 107 ntBASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 Y_RNA.649-201ENST00000459077 103 ntBASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 RN7SKP19-201ENST00000516016 252 ntBASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 RNU6-513P-201ENST00000516104 104 ntBASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 AC006349.1-201ENST00000555526 235 ntBASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 AC018555.1-201ENST00000567548 1980 ntBASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 AC016588.2-201ENST00000632484 3021 ntBASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCRAQ6ISU1 AL031595.2-201ENST00000624215 19071 ntBASIC4.49□□□□□ -1.69
PTCRAQ6ISU1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCRAQ6ISU1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PTCRAQ6ISU1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCRAQ6ISU1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCRAQ6ISU1 Y_RNA.111-201ENST00000363248 100 ntBASIC4.49□□□□□ -1.69
PTCRAQ6ISU1 RNU6-529P-201ENST00000363383 104 ntBASIC4.49□□□□□ -1.69
PTCRAQ6ISU1 MIR873-201ENST00000401120 77 ntBASIC4.49□□□□□ -1.69
PTCRAQ6ISU1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms