Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC068050.1-201ENST00000394891 380 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 DEFB108C-201ENST00000400154 252 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC007098.1-201ENST00000420122 367 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AL591043.1-201ENST00000432461 424 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 IFNA20P-201ENST00000436840 528 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 MTCO2P16-201ENST00000436962 677 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 PRPS1P1-201ENST00000445305 876 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC108210.2-201ENST00000503681 201 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC010424.1-201ENST00000506336 297 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 COPS8P3-201ENST00000526024 482 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 CYCSP27-201ENST00000527643 293 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC006362.1-201ENST00000567392 174 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 DEFB122-202ENST00000569013 197 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 MIR3683-201ENST00000580847 82 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 AC078795.2-201ENST00000602835 1252 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.8□□□□□ -2.12
ATL3Q6DD88 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
ATL3Q6DD88 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
ATL3Q6DD88 Y_RNA.480-201ENST00000384364 102 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 RNU6-1222P-201ENST00000384615 107 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 MIR544A-201ENST00000384855 91 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 RNU6-1158P-201ENST00000391167 107 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 RPS29P13-201ENST00000402041 169 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 RNU2-32P-201ENST00000411193 191 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 SRIP3-201ENST00000413200 219 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.79□□□□□ -2.12
ATL3Q6DD88 AC244636.1-201ENST00000421152 228 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 AL353193.1-201ENST00000421444 268 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 AL360221.1-201ENST00000445989 335 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.79□□□□□ -2.12
ATL3Q6DD88 AL122001.1-201ENST00000457027 370 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 AMD1P1-201ENST00000457220 922 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.79□□□□□ -2.12
ATL3Q6DD88 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.79□□□□□ -2.12
ATL3Q6DD88 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.79□□□□□ -2.12
ATL3Q6DD88 RNU6-377P-201ENST00000515965 102 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 RNU5F-2P-201ENST00000516066 82 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ATL3Q6DD88 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.79□□□□□ -2.12
ATL3Q6DD88 AL137161.1-201ENST00000532231 390 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 AC022616.8-201ENST00000533569 253 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 AK6P1-201ENST00000540219 478 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.79□□□□□ -2.12
ATL3Q6DD88 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.79□□□□□ -2.12
ATL3Q6DD88 RSL24D1P11-201ENST00000591045 491 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 Z82243.1-201ENST00000609432 473 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 MIR6845-201ENST00000613182 61 ntBASIC1.79□□□□□ -2.12
ATL3Q6DD88 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ATL3Q6DD88 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
ATL3Q6DD88 RNU6-552P-201ENST00000362869 119 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 RNU6-527P-201ENST00000363425 104 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 Y_RNA.359-201ENST00000365498 102 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 RNU5A-6P-201ENST00000384136 116 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.78□□□□□ -2.12
ATL3Q6DD88 AC073415.1-201ENST00000449240 153 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 TPT1P7-201ENST00000458300 517 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 RNU7-180P-201ENST00000459240 63 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 Y_RNA.638-201ENST00000459374 113 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 RPL23AP63-201ENST00000498752 471 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 AC108078.1-201ENST00000508073 725 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.78□□□□□ -2.12
ATL3Q6DD88 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.78□□□□□ -2.12
ATL3Q6DD88 AP003392.2-201ENST00000527269 208 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.78□□□□□ -2.12
ATL3Q6DD88 AC091135.1-201ENST00000585943 307 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 RN7SKP299-201ENST00000606679 301 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 AC002044.1-201ENST00000606707 158 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
ATL3Q6DD88 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 U1.36-201ENST00000620684 176 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 AC097372.5-201ENST00000623665 376 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 AC090517.3-201ENST00000625170 141 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 AC090582.1-201ENST00000636321 199 ntBASIC1.78□□□□□ -2.12
ATL3Q6DD88 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
ATL3Q6DD88 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ATL3Q6DD88 AC006026.1-201ENST00000444025 1803 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 snoU2_19.1-201ENST00000362361 80 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 RNU6-212P-201ENST00000362642 104 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 RNU6-428P-201ENST00000362942 107 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 RNU6-336P-201ENST00000364891 107 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ATL3Q6DD88 SNORD116-1-201ENST00000384335 95 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 RNU6-517P-201ENST00000384362 110 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 MIR320A-201ENST00000385302 82 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms