Protein–RNA interactions for Protein: Q5VYK3

ECM29, Proteasome-associated protein ECM29 homolog, humanhuman

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM29Q5VYK3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.73□□□□□ -2.29
ECM29Q5VYK3 Y_RNA.33-201ENST00000362591 102 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 Y_RNA.178-201ENST00000363832 102 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 AC006366.1-201ENST00000422002 759 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 HSPE1P9-201ENST00000440046 311 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.72□□□□□ -2.29
ECM29Q5VYK3 SNORA3.4-201ENST00000515969 96 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 RNU6-1092P-201ENST00000516955 87 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.72□□□□□ -2.29
ECM29Q5VYK3 MIR544B-201ENST00000582372 78 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 AL136363.2-201ENST00000604173 851 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 BNIP3P31-201ENST00000604515 566 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 AC112220.3-201ENST00000605502 502 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 AC024060.1-201ENST00000607052 494 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 AL590240.4-201ENST00000616908 390 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 SCARNA4-202ENST00000625402 129 ntBASIC0.72□□□□□ -2.29
ECM29Q5VYK3 RNA5SP457-201ENST00000363657 124 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 MIR544A-201ENST00000384855 91 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.71□□□□□ -2.3
ECM29Q5VYK3 MTND1P30-201ENST00000441241 901 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 CR769776.1-201ENST00000441254 787 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AC134050.1-201ENST00000495088 933 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 RNU5A-4P-201ENST00000516588 111 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AL592221.1-201ENST00000605266 382 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AC126544.2-201ENST00000625174 749 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.71□□□□□ -2.3
ECM29Q5VYK3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
ECM29Q5VYK3 RNU6-23P-201ENST00000363283 107 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 Y_RNA.132-201ENST00000363421 102 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.71□□□□□ -2.3
ECM29Q5VYK3 Y_RNA.472-201ENST00000384322 102 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 RNU6-733P-201ENST00000410759 104 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 MTCO1P21-201ENST00000416634 589 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AL163195.1-201ENST00000496941 348 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AC021146.8-201ENST00000507455 733 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 RNU6-677P-201ENST00000516914 101 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AL606834.3-201ENST00000602615 496 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AC024940.5-201ENST00000622889 474 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AC022513.1-201ENST00000624512 117 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.71□□□□□ -2.3
ECM29Q5VYK3 AC068205.3-201ENST00000636385 468 ntBASIC0.71□□□□□ -2.3
ECM29Q5VYK3 RNU6-296P-201ENST00000384608 107 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 MIR520A-201ENST00000384862 85 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 AL590556.1-201ENST00000423231 483 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 AL353777.1-201ENST00000425552 326 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 AL358176.2-201ENST00000425769 204 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 LARP1BP3-201ENST00000437229 869 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 RPL31P3-201ENST00000458430 332 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.7□□□□□ -2.3
ECM29Q5VYK3 AL512310.8-201ENST00000550183 120 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.7□□□□□ -2.3
ECM29Q5VYK3 CYP3A52P-201ENST00000563326 91 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 RNU6-87P-201ENST00000607561 108 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 RNU6-1192P-201ENST00000612197 107 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 RNU6-489P-201ENST00000618289 107 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 AC243829.3-201ENST00000622177 108 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 MIR924-201ENST00000638017 53 ntBASIC0.7□□□□□ -2.3
ECM29Q5VYK3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
ECM29Q5VYK3 AC073343.1-201ENST00000328239 651 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 MIR302D-201ENST00000362275 68 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 RNU6-371P-201ENST00000364283 108 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 RNU6-142P-201ENST00000384019 107 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 MTCO3P41-201ENST00000414801 328 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.69□□□□□ -2.3
ECM29Q5VYK3 PGBD4P5-201ENST00000445958 426 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.69□□□□□ -2.3
ECM29Q5VYK3 AC005741.1-201ENST00000511094 432 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 AC067942.3-201ENST00000512025 362 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 AC068587.4-201ENST00000533893 186 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 HMGB1P33-201ENST00000563485 527 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.69□□□□□ -2.3
ECM29Q5VYK3 OR4G3P-201ENST00000633500 913 ntBASIC0.69□□□□□ -2.3
ECM29Q5VYK3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
ECM29Q5VYK3 SNORA29-201ENST00000384183 140 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 AL008629.1-201ENST00000438615 184 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 OR2AQ1P-201ENST00000451972 200 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.68□□□□□ -2.3
ECM29Q5VYK3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.68□□□□□ -2.3
ECM29Q5VYK3 AC097473.1-201ENST00000508142 408 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 RNU6-496P-201ENST00000516145 99 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 Y_RNA.687-201ENST00000516558 91 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 RNA5SP476-201ENST00000516613 103 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 AC107934.1-201ENST00000522215 217 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 ADI1P3-201ENST00000549509 470 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.68□□□□□ -2.3
ECM29Q5VYK3 AC072039.2-201ENST00000608883 439 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 AC131235.4-201ENST00000609288 620 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 RNU6-212P-201ENST00000362642 104 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 RPS3AP36-201ENST00000398190 775 ntBASIC0.68□□□□□ -2.3
ECM29Q5VYK3 AC069282.1-201ENST00000411911 526 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms