Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 SNORD98-201ENST00000636377 67 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 AC004925.1-201ENST00000624256 2706 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 MAPK10-286ENST00000641208 8747 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 Y_RNA.78-201ENST00000362970 110 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 RNY1P10-201ENST00000363268 113 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 RNU6-1134P-201ENST00000365156 101 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 RNU6-487P-201ENST00000365430 104 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 MIR518C-201ENST00000384822 101 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 RNA5SP239-201ENST00000410218 129 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 AC004866.1-201ENST00000411748 78 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 RPS12P10-201ENST00000427031 377 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 RPS29P17-201ENST00000430795 166 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 RPL37P4-201ENST00000448908 268 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 AC108145.1-201ENST00000503770 153 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 Vault.1-201ENST00000516474 102 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 RNU7-116P-201ENST00000516940 62 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 AC009163.5-201ENST00000575421 637 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 MIR3923-201ENST00000579521 83 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 AC090897.2-201ENST00000581715 130 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 MIR6716-201ENST00000613413 80 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 AL035470.1-201ENST00000622571 220 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 AC125257.1-201ENST00000560400 2930 ntBASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.11□□□□□ -1.75
RNFT1Q5M7Z0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 AL159152.1-201ENST00000635019 2587 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 SCN1A-220ENST00000641603 12506 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 U3.8-201ENST00000363675 217 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 RNA5SP515-201ENST00000364570 118 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 RNU1-73P-201ENST00000383971 164 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 SDHCP2-201ENST00000398565 501 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 CBX3P9-201ENST00000402326 552 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 MIR1255A-201ENST00000408338 113 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 AF228730.3-201ENST00000436691 102 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 RPL35AP15-201ENST00000468042 339 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 RPL36AP21-201ENST00000490372 323 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 RPL30P5-201ENST00000494923 336 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 AC015795.1-201ENST00000513669 327 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 SNORA18.4-201ENST00000516440 124 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 RN7SKP21-201ENST00000516503 220 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 TOMM20P2-201ENST00000540082 421 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 AL591034.3-201ENST00000605511 685 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 TCL6_2.1-201ENST00000615162 119 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 AC005562.2-201ENST00000618264 111 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 SALL4P2-201ENST00000423288 2910 ntBASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNFT1Q5M7Z0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 RNU1-75P-201ENST00000347264 129 ntBASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 SNORA63.5-201ENST00000363548 123 ntBASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 RNU4-41P-201ENST00000364426 143 ntBASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 Y_RNA.244-201ENST00000364484 109 ntBASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 RNA5SP235-201ENST00000365411 114 ntBASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 DYNLT3P1-201ENST00000378574 347 ntBASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 RNU6-622P-201ENST00000384272 103 ntBASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 SNORA11-201ENST00000408789 128 ntBASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 RN7SKP177-201ENST00000410567 355 ntBASIC4.09□□□□□ -1.75
RNFT1Q5M7Z0 RNU2-70P-201ENST00000410718 179 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms