Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AL353752.1-201ENST00000454946 260 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 AC105758.1-201ENST00000506038 399 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 RNA5SP356-201ENST00000515972 94 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 RNU6-612P-201ENST00000516909 102 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 SNORA31.26-201ENST00000517250 137 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 CPDP1-201ENST00000579660 283 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 MIR3668-201ENST00000582138 75 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 AC005899.2-201ENST00000584353 90 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 AC078899.3-201ENST00000599065 212 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 AC241585.2-209ENST00000638217 143 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 ZNF72P-201ENST00000425869 1908 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 RNU6-702P-201ENST00000364982 107 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 RNU6-1222P-201ENST00000384615 107 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 SNORD15B-201ENST00000384714 146 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 Y_RNA.574-201ENST00000384766 95 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 MIR767-201ENST00000390228 109 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 RNU6-823P-201ENST00000391042 103 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 RPS29P13-201ENST00000402041 169 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 RNU6-1140P-201ENST00000410517 106 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 RNU2-23P-201ENST00000410545 195 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 AL353997.1-201ENST00000432936 108 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 RPS26P21-201ENST00000475397 348 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 RPS27P26-201ENST00000494583 239 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 RN7SKP282-201ENST00000516824 299 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 SNORA31.18-201ENST00000517043 134 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 GTF3AP2-201ENST00000557014 266 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 AC025281.1-201ENST00000567026 265 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 AC009163.5-201ENST00000575421 637 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 MIR3162-201ENST00000581818 82 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 AL591516.1-201ENST00000611326 274 ntBASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SLC44A4Q53GD3 U3.6-201ENST00000363622 211 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 RNY3P11-201ENST00000364153 102 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 RNU6-99P-201ENST00000364721 107 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 Y_RNA.314-201ENST00000365114 102 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 SNORA26.7-201ENST00000391288 122 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 AC074117.2-201ENST00000417130 397 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 PTGES3P4-201ENST00000426243 356 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 AL591043.1-201ENST00000432461 424 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 AC011816.1-201ENST00000441346 546 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 CHEK2P4-201ENST00000450340 246 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 AC006026.2-201ENST00000457376 180 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 FO393415.2-201ENST00000480085 343 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 RAC1P5-201ENST00000512182 576 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 RNU6-307P-201ENST00000516743 106 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 SNORA31.23-201ENST00000517219 133 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 AC010186.2-204ENST00000537668 439 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 GNAI2P1-201ENST00000541815 315 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 HSBP1P1-201ENST00000555205 166 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 AL355877.2-201ENST00000603670 358 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 AL606534.2-204ENST00000635008 178 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 AC110079.1-202ENST00000635213 138 ntBASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC44A4Q53GD3 RBBP8P1-201ENST00000449447 1844 ntBASIC3.21□□□□□ -1.89
SLC44A4Q53GD3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
SLC44A4Q53GD3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 SNORA54-201ENST00000384281 123 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 RNU6-19P-201ENST00000384718 107 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 MT-TR-201ENST00000387439 65 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 RNU6-750P-201ENST00000390946 107 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 RNU6-101P-201ENST00000410323 104 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 RNU6-174P-201ENST00000410406 106 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 AL139281.1-201ENST00000422120 335 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 AC004383.1-201ENST00000438135 289 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 AC243964.1-201ENST00000441814 261 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 U8.21-201ENST00000459536 136 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 AC021205.2-201ENST00000480069 347 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 AC022447.4-201ENST00000504053 364 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 AP005902.1-201ENST00000521358 186 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 CBX3P8-201ENST00000532412 525 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 CR383656.8-201ENST00000549046 145 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 SUB1P3-201ENST00000564581 315 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 ELOCP29-201ENST00000588193 334 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 uc_338.25-201ENST00000613756 156 ntBASIC3.21□□□□□ -1.9
SLC44A4Q53GD3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms