Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC38Q502W7 AC016256.1-201ENST00000547971 354 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC38Q502W7 RPL12P50-201ENST00000603116 116 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 AL034555.1-201ENST00000604816 211 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 uc_338.5-201ENST00000611839 155 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC38Q502W7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CCDC38Q502W7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC38Q502W7 RNA5SP393-201ENST00000363423 117 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 RNU4-56P-201ENST00000364700 142 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 U8.8-201ENST00000365399 135 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 RNU1-138P-201ENST00000384093 164 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 RNU6-1032P-201ENST00000384100 107 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 EEF1A1P41-201ENST00000414667 207 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC38Q502W7 AL353572.1-201ENST00000442490 417 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 GPM6BP3-201ENST00000442797 145 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 AP001486.1-201ENST00000463339 476 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 HMGN1P12-201ENST00000499125 195 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 MTND5P5-201ENST00000503764 376 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC38Q502W7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC38Q502W7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC38Q502W7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC38Q502W7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC38Q502W7 AC021231.3-201ENST00000558497 370 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 LARP7P3-201ENST00000579888 337 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 ZNF861P-201ENST00000588126 639 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 POLR3GP2-201ENST00000588366 668 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 AL355297.2-201ENST00000604792 129 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 MIR3976-201ENST00000606807 139 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 AC005858.4-201ENST00000623191 700 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 AC090517.3-201ENST00000625170 141 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 SNORA43.4-201ENST00000629559 138 ntBASIC2.84□□□□□ -1.95
CCDC38Q502W7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC38Q502W7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC38Q502W7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC38Q502W7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 SNORA72.1-201ENST00000363485 129 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC38Q502W7 SNORA18.3-201ENST00000384122 132 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC38Q502W7 MIR548K-201ENST00000408406 116 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 PDCL2P1-201ENST00000419302 352 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC38Q502W7 AC092473.1-201ENST00000441098 221 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 SNORA59A-201ENST00000459326 152 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 AL049873.1-201ENST00000480540 376 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 AC083906.5-201ENST00000503722 328 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 SNORA31.16-201ENST00000516773 139 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 SNORA48.11-201ENST00000517015 89 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 RNU1-54P-201ENST00000517181 120 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC38Q502W7 HMGB1P24-202ENST00000615653 685 ntBASIC2.83□□□□□ -1.96
CCDC38Q502W7 Y_RNA.123-201ENST00000363338 102 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 RNU6-784P-201ENST00000384330 106 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CCDC38Q502W7 AC074085.1-201ENST00000413598 418 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 AL590556.1-201ENST00000423231 483 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 AL139132.1-201ENST00000431587 344 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC38Q502W7 HMGB1P18-201ENST00000438801 619 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC38Q502W7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC38Q502W7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.82□□□□□ -1.96
CCDC38Q502W7 RPS27P27-201ENST00000498779 255 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC38Q502W7 ACA59.1-201ENST00000515966 143 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 RNU6-567P-201ENST00000516746 107 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 MIR548S-201ENST00000581352 82 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 AC005730.3-201ENST00000583067 366 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 U4atac.1-201ENST00000618345 95 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 FO624990.1-201ENST00000636373 85 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 AL450472.1-202ENST00000637286 180 ntBASIC2.82□□□□□ -1.96
CCDC38Q502W7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC38Q502W7 SNORA38-201ENST00000363946 132 ntBASIC2.81□□□□□ -1.96
CCDC38Q502W7 SNORD81.2-201ENST00000365153 76 ntBASIC2.81□□□□□ -1.96
CCDC38Q502W7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC38Q502W7 HMGB3P2-201ENST00000411913 584 ntBASIC2.81□□□□□ -1.96
CCDC38Q502W7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC38Q502W7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC38Q502W7 NCOR1P3-201ENST00000420479 303 ntBASIC2.81□□□□□ -1.96
CCDC38Q502W7 AC107399.1-201ENST00000451226 265 ntBASIC2.81□□□□□ -1.96
CCDC38Q502W7 CBX3P7-201ENST00000532876 502 ntBASIC2.81□□□□□ -1.96
CCDC38Q502W7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC38Q502W7 AL121579.1-201ENST00000555129 305 ntBASIC2.81□□□□□ -1.96
CCDC38Q502W7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC38Q502W7 FGF7P1-201ENST00000582820 288 ntBASIC2.81□□□□□ -1.96
CCDC38Q502W7 AL355073.2-201ENST00000612106 557 ntBASIC2.81□□□□□ -1.96
CCDC38Q502W7 MIR6128-201ENST00000615528 109 ntBASIC2.81□□□□□ -1.96
CCDC38Q502W7 AC069528.2-201ENST00000624849 1991 ntBASIC2.81□□□□□ -1.96
CCDC38Q502W7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC38Q502W7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC38Q502W7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC38Q502W7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CCDC38Q502W7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CCDC38Q502W7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC38Q502W7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC38Q502W7 RNU4-15P-201ENST00000362613 141 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms