Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.63□□□□□ -1.99
USP41Q3LFD5 AC007969.2-201ENST00000441891 191 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 USP9YP8-201ENST00000441913 500 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.63□□□□□ -1.99
USP41Q3LFD5 MTND5P20-201ENST00000448677 143 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.63□□□□□ -1.99
USP41Q3LFD5 RPL23AP70-201ENST00000483361 460 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 MTCO1P29-201ENST00000496868 288 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 RNA5SP112-201ENST00000515937 99 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 Y_RNA.702-201ENST00000516843 96 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.63□□□□□ -1.99
USP41Q3LFD5 AP005639.2-201ENST00000527592 928 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.63□□□□□ -1.99
USP41Q3LFD5 uc_338.5-201ENST00000611839 155 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
USP41Q3LFD5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USP41Q3LFD5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.63□□□□□ -1.99
USP41Q3LFD5 MTND4P12-201ENST00000498999 1377 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USP41Q3LFD5 Y_RNA.151-201ENST00000363566 112 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 Y_RNA.166-201ENST00000363730 102 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 SET-203ENST00000372688 801 ntTSL 2 BASIC2.62□□□□□ -1.99
USP41Q3LFD5 RNU6-933P-201ENST00000384424 107 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 RNU6-790P-201ENST00000384479 105 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 MIR548F5-201ENST00000408421 86 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.62□□□□□ -1.99
USP41Q3LFD5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.62□□□□□ -1.99
USP41Q3LFD5 AL645568.3-201ENST00000433683 316 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.62□□□□□ -1.99
USP41Q3LFD5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.62□□□□□ -1.99
USP41Q3LFD5 RPL39P29-201ENST00000447779 157 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 MTND1P11-201ENST00000456661 876 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 AC091951.2-201ENST00000500762 203 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 AC234781.5-201ENST00000508429 271 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 RNU6-507P-201ENST00000516045 100 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 RNU6-612P-201ENST00000516909 102 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 RNA5SP402-201ENST00000517148 110 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.62□□□□□ -1.99
USP41Q3LFD5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.62□□□□□ -1.99
USP41Q3LFD5 CKS1BP7-201ENST00000522230 235 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 AC079598.5-201ENST00000547460 117 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 MIR3199-1-201ENST00000582434 88 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 AC243960.4-201ENST00000600532 288 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 VN1R107P-201ENST00000601784 209 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 TPTEP1-208ENST00000636884 213 ntBASIC2.62□□□□□ -1.99
USP41Q3LFD5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USP41Q3LFD5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.62□□□□□ -1.99
USP41Q3LFD5 AC010329.5-201ENST00000623497 2174 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
USP41Q3LFD5 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 RNU6-212P-201ENST00000362642 104 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 RNU6-486P-201ENST00000363116 107 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 RNU6-461P-201ENST00000364195 107 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
USP41Q3LFD5 RNA5SP425-201ENST00000410336 112 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.61□□□□□ -1.99
USP41Q3LFD5 MTND3P9-201ENST00000429526 346 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 AC092427.1-202ENST00000430569 476 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 HMGB1P18-201ENST00000438801 619 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 PCMTD1P1-201ENST00000455560 355 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 U8.21-201ENST00000459536 136 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 SMURF2P1-201ENST00000514992 481 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 RN7SKP40-201ENST00000517211 242 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.61□□□□□ -1.99
USP41Q3LFD5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.61□□□□□ -1.99
USP41Q3LFD5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.61□□□□□ -1.99
USP41Q3LFD5 AC073410.2-201ENST00000603240 332 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 AC007792.1-201ENST00000623023 402 ntBASIC2.61□□□□□ -1.99
USP41Q3LFD5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USP41Q3LFD5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USP41Q3LFD5 AC007336.1-201ENST00000576365 3828 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 AC080128.1-201ENST00000474389 1917 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
USP41Q3LFD5 Y_RNA.142-201ENST00000363491 102 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 U3.13-201ENST00000364804 214 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 RNU6-306P-201ENST00000384617 107 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 MIR521-1-201ENST00000384902 87 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 AL356432.1-201ENST00000405809 419 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 RNA5SP181-201ENST00000410246 98 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 RNU2-25P-201ENST00000411041 191 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 Z82205.1-201ENST00000428456 297 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.6□□□□□ -1.99
USP41Q3LFD5 MTND1P17-201ENST00000448961 204 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.6□□□□□ -1.99
USP41Q3LFD5 AC073901.1-201ENST00000462471 408 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 MTND5P5-201ENST00000503764 376 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.6□□□□□ -1.99
USP41Q3LFD5 AC021269.2-201ENST00000532318 330 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.6□□□□□ -1.99
USP41Q3LFD5 MIR3616-201ENST00000584070 92 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 AC091135.1-201ENST00000585943 307 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.6□□□□□ -1.99
USP41Q3LFD5 AC019193.3-201ENST00000609144 554 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 MIR6128-201ENST00000615528 109 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 AC104260.1-201ENST00000616660 539 ntBASIC2.6□□□□□ -1.99
USP41Q3LFD5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USP41Q3LFD5 RNU6-1010P-201ENST00000362757 107 ntBASIC2.59□□□□□ -1.99
USP41Q3LFD5 RNU6-529P-201ENST00000363383 104 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms