Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 MTND1P30-201ENST00000441241 901 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 GAPDHP17-201ENST00000449858 1001 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SSX1Q16384 snoU13.9-201ENST00000458927 103 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 AC004223.1-201ENST00000479840 271 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.12□□□□□ -2.23
SSX1Q16384 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 RNU6-410P-201ENST00000517006 107 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SSX1Q16384 AP003072.2-201ENST00000527756 676 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.12□□□□□ -2.23
SSX1Q16384 AP003034.1-201ENST00000534621 422 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 MIR4775-201ENST00000581168 75 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 BNIP3P16-201ENST00000589779 534 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 BNIP3P8-201ENST00000597863 560 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 AL158827.2-201ENST00000602494 330 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 AL691447.3-201ENST00000635020 330 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 AC068205.3-201ENST00000636385 468 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 AP000560.1-201ENST00000624150 1937 ntBASIC1.12□□□□□ -2.23
SSX1Q16384 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
SSX1Q16384 AC245060.5-201ENST00000610778 3293 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SSX1Q16384 RNU6-428P-201ENST00000362942 107 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 RNY4P34-201ENST00000364779 95 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.11□□□□□ -2.23
SSX1Q16384 AL590135.1-201ENST00000422215 156 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC019205.3-201ENST00000424573 156 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.11□□□□□ -2.23
SSX1Q16384 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.11□□□□□ -2.23
SSX1Q16384 AC244670.1-201ENST00000436879 112 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.11□□□□□ -2.23
SSX1Q16384 AC016700.2-201ENST00000446011 156 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC079781.2-201ENST00000446424 169 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC013470.1-201ENST00000453438 462 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AL162395.1-201ENST00000457882 422 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 snoU13.26-201ENST00000459452 105 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 SNRPGP7-201ENST00000469016 106 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC015911.1-201ENST00000495111 156 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 ATP5EP1-201ENST00000510257 156 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.11□□□□□ -2.23
SSX1Q16384 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.11□□□□□ -2.23
SSX1Q16384 RNU6-1129P-201ENST00000515964 104 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 SNORA31.16-201ENST00000516773 139 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC109479.2-201ENST00000517842 174 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.11□□□□□ -2.23
SSX1Q16384 SNORA77B-201ENST00000578179 125 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 MIR5094-201ENST00000578766 85 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 MIR4422-201ENST00000581938 83 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AL590229.1-201ENST00000603497 542 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AL136370.1-201ENST00000608166 691 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC027449.1-201ENST00000608890 407 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC068787.1-201ENST00000623908 691 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AL603839.4-201ENST00000624658 1005 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 AC241585.2-209ENST00000638217 143 ntBASIC1.11□□□□□ -2.23
SSX1Q16384 ZNF209P-201ENST00000593450 2304 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 Y_RNA.67-201ENST00000362870 100 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 U3.4-201ENST00000363352 213 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 RNU6-271P-201ENST00000363858 105 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 SNORD32A-201ENST00000364805 84 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 MIR454-201ENST00000390180 115 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 RNA5SP201-201ENST00000410316 124 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 RNU6-195P-201ENST00000411352 109 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 MTCO3P41-201ENST00000414801 328 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.1□□□□□ -2.23
SSX1Q16384 GPR143P-201ENST00000434155 205 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 SNRPEP8-201ENST00000442866 260 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.1□□□□□ -2.23
SSX1Q16384 AC097473.1-201ENST00000508142 408 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 MTCO3P7-201ENST00000510008 774 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 SNORD27.1-201ENST00000516319 72 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 RNU6-548P-201ENST00000517083 115 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.1□□□□□ -2.23
SSX1Q16384 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.1□□□□□ -2.23
SSX1Q16384 AC109446.1-201ENST00000566172 220 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 AC090616.2-202ENST00000584248 222 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.1□□□□□ -2.23
SSX1Q16384 AC012507.3-201ENST00000603556 477 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 AC011458.1-201ENST00000604034 617 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 AP001485.1-201ENST00000604799 199 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 AC092354.1-201ENST00000606057 376 ntBASIC1.1□□□□□ -2.23
SSX1Q16384 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SSX1Q16384 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SSX1Q16384 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
SSX1Q16384 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.09□□□□□ -2.23
SSX1Q16384 SNORD26-201ENST00000384147 75 ntBASIC1.09□□□□□ -2.23
SSX1Q16384 SNORA12.2-201ENST00000391040 156 ntBASIC1.09□□□□□ -2.23
SSX1Q16384 RPS29P13-201ENST00000402041 169 ntBASIC1.09□□□□□ -2.23
SSX1Q16384 RN7SKP61-201ENST00000410642 295 ntBASIC1.09□□□□□ -2.23
SSX1Q16384 AC139712.2-201ENST00000424302 339 ntBASIC1.09□□□□□ -2.23
SSX1Q16384 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SSX1Q16384 AC078809.1-201ENST00000427601 140 ntBASIC1.09□□□□□ -2.23
SSX1Q16384 AL596276.1-201ENST00000434465 418 ntBASIC1.09□□□□□ -2.23
SSX1Q16384 AC009961.2-201ENST00000435771 251 ntBASIC1.09□□□□□ -2.23
SSX1Q16384 UBE2V1P8-201ENST00000437166 265 ntBASIC1.09□□□□□ -2.23
SSX1Q16384 SNRPFP4-201ENST00000456366 242 ntBASIC1.09□□□□□ -2.23
SSX1Q16384 MTCO2P6-201ENST00000463134 685 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms