Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 U4.7-201ENST00000638126 106 ntBASIC1.68□□□□□ -2.14
SMARCB1Q12824 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SMARCB1Q12824 MIR378A-201ENST00000362177 66 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 RNU6-661P-201ENST00000362409 107 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 RNU6-428P-201ENST00000362942 107 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 RNU6-1120P-201ENST00000362988 108 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 RNU5E-7P-201ENST00000365290 117 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SMARCB1Q12824 RNU6-1274P-201ENST00000384557 107 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 RNU6-1158P-201ENST00000391167 107 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 RAP1BP3-201ENST00000407180 549 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 OR9R1P-201ENST00000412200 877 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 AL356010.1-201ENST00000456364 102 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 AC022364.2-201ENST00000457963 554 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 RPL31P3-201ENST00000458430 332 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 snoU13.14-201ENST00000459372 104 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.67□□□□□ -2.14
SMARCB1Q12824 AC108078.1-201ENST00000508073 725 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 MTCO3P7-201ENST00000510008 774 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.67□□□□□ -2.14
SMARCB1Q12824 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.67□□□□□ -2.14
SMARCB1Q12824 SNORA48.11-201ENST00000517015 89 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.67□□□□□ -2.14
SMARCB1Q12824 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.67□□□□□ -2.14
SMARCB1Q12824 IMMP1LP2-201ENST00000552954 492 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 MTCO3P23-201ENST00000561363 289 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.67□□□□□ -2.14
SMARCB1Q12824 MIR3611-201ENST00000584484 83 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 AC073648.5-201ENST00000603502 305 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 AC016727.1-205ENST00000605437 569 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SMARCB1Q12824 AC022418.1-201ENST00000624118 445 ntBASIC1.67□□□□□ -2.14
SMARCB1Q12824 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.67□□□□□ -2.14
SMARCB1Q12824 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SMARCB1Q12824 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.67□□□□□ -2.14
SMARCB1Q12824 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SMARCB1Q12824 Y_RNA.51-201ENST00000362725 102 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 RNU6-105P-201ENST00000363909 104 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 RNU6-944P-201ENST00000364023 107 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 RNU6-60P-201ENST00000364792 103 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
SMARCB1Q12824 SNORD116-2-201ENST00000384274 95 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 RNU6-393P-201ENST00000384475 107 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 SNORD116-6-201ENST00000384711 96 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 SNORA67.6-201ENST00000391093 99 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 BTF3L4P1-201ENST00000413813 468 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 AC009238.1-201ENST00000442165 424 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 PRPS1P1-201ENST00000445305 876 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 AC009237.6-201ENST00000446969 424 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 AC073415.1-201ENST00000449240 153 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.66□□□□□ -2.14
SMARCB1Q12824 AMD1P1-201ENST00000457220 922 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.66□□□□□ -2.14
SMARCB1Q12824 AC027575.1-201ENST00000481064 460 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 SNORA4.4-201ENST00000515921 135 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 AC109329.1-201ENST00000518744 317 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.66□□□□□ -2.14
SMARCB1Q12824 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.66□□□□□ -2.14
SMARCB1Q12824 HIF1AP1-201ENST00000553642 175 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.66□□□□□ -2.14
SMARCB1Q12824 MIR4498-201ENST00000577599 66 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.66□□□□□ -2.14
SMARCB1Q12824 AC008536.2-201ENST00000607284 349 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 Z82243.1-201ENST00000609432 473 ntBASIC1.66□□□□□ -2.14
SMARCB1Q12824 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.66□□□□□ -2.14
SMARCB1Q12824 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SMARCB1Q12824 RNA5SP276-201ENST00000362580 94 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 RNU6-212P-201ENST00000362642 104 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 RNU6-336P-201ENST00000364891 107 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 SNORA25B-201ENST00000365507 128 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCB1Q12824 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCB1Q12824 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.65□□□□□ -2.15
SMARCB1Q12824 AC073464.1-201ENST00000429823 534 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 USP9YP14-201ENST00000430663 563 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 AL365400.1-201ENST00000431854 640 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 AL122001.1-201ENST00000457027 370 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 RNU7-180P-201ENST00000459240 63 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 GMFBP1-201ENST00000467831 427 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 RN7SKP298-201ENST00000515950 94 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 RNU6-970P-201ENST00000516312 107 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SMARCB1Q12824 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.65□□□□□ -2.15
SMARCB1Q12824 AC023050.3-201ENST00000541142 333 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.65□□□□□ -2.15
SMARCB1Q12824 SUB1P3-201ENST00000564581 315 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 MIR4303-201ENST00000581299 66 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCB1Q12824 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.65□□□□□ -2.15
SMARCB1Q12824 snoU13.31-201ENST00000607291 104 ntBASIC1.65□□□□□ -2.15
SMARCB1Q12824 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SMARCB1Q12824 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SMARCB1Q12824 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.65□□□□□ -2.15
SMARCB1Q12824 RNU6-655P-201ENST00000362858 107 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 RNU6-1210P-201ENST00000363775 107 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 RNU6-266P-201ENST00000364225 107 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 RNA5SP240-201ENST00000365355 128 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 RNU6-692P-201ENST00000384496 107 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms