Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC096649.2-201ENST00000416186 393 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.94□□□□□ -1.78
PCDH1Q08174 AC010618.1-201ENST00000469924 477 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 AC107626.1-201ENST00000471084 183 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 AC103975.1-201ENST00000482506 483 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 RPL31P61-201ENST00000496160 376 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 RNU5F-2P-201ENST00000516066 82 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 MIR2114-201ENST00000516645 80 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 SUMO2P18-201ENST00000518873 252 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDH1Q08174 AC074050.1-201ENST00000563247 211 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 MIR5684-201ENST00000585074 65 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 AC020914.4-201ENST00000597690 277 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 AC006380.1-201ENST00000603598 186 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 AC023043.4-201ENST00000612081 449 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 MIR6716-201ENST00000613413 80 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH1Q08174 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH1Q08174 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH1Q08174 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDH1Q08174 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PCDH1Q08174 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
PCDH1Q08174 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH1Q08174 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDH1Q08174 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
PCDH1Q08174 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDH1Q08174 AC068538.1-201ENST00000376856 336 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 RNU6-1117P-201ENST00000384525 104 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PCDH1Q08174 RNU2-2P-201ENST00000410396 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDH1Q08174 RPL23AP82-202ENST00000427528 469 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDH1Q08174 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDH1Q08174 snoU13.28-201ENST00000459235 104 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
PCDH1Q08174 RPS4XP13-201ENST00000483219 789 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 AC105137.1-201ENST00000484355 562 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDH1Q08174 RN7SL604P-201ENST00000492589 296 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDH1Q08174 RNU1-61P-201ENST00000516107 151 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDH1Q08174 MIR1254-2-201ENST00000579553 63 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 MIR4644-201ENST00000579929 84 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 RN7SL600P-201ENST00000581811 299 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 MIR3939-201ENST00000582614 106 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 HSPE1P7-201ENST00000604681 321 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 ARF4P1-201ENST00000605447 541 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 RNU2-4P-201ENST00000606190 192 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 U2.15-201ENST00000611544 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 U2.16-201ENST00000613119 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 U2.12-201ENST00000613778 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 U2.9-201ENST00000615427 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 U2.11-201ENST00000616345 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 U2.2-201ENST00000616535 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 U2.3-201ENST00000617785 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 U2.19-201ENST00000618602 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 RNU2-1-201ENST00000618664 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 U2.6-201ENST00000619225 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 U2.5-201ENST00000619465 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 U2.10-201ENST00000620268 191 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 AL773545.4-201ENST00000637262 310 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 AL513478.4-201ENST00000641636 310 ntBASIC3.93□□□□□ -1.78
PCDH1Q08174 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDH1Q08174 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDH1Q08174 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDH1Q08174 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PCDH1Q08174 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH1Q08174 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH1Q08174 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
PCDH1Q08174 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH1Q08174 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
PCDH1Q08174 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDH1Q08174 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH1Q08174 Y_RNA.238-201ENST00000364441 102 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 RNA5SP479-201ENST00000364858 117 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 Y_RNA.329-201ENST00000365209 107 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 Y_RNA.343-201ENST00000365354 112 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 RNU4-17P-201ENST00000365598 141 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 RNU6-449P-201ENST00000383914 107 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDH1Q08174 PTGES3P4-201ENST00000426243 356 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 RPL29P14-201ENST00000495837 428 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH1Q08174 RNU2-12P-201ENST00000517216 168 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 AC009127.3-201ENST00000570531 403 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 AL034555.1-201ENST00000604816 211 ntBASIC3.92□□□□□ -1.78
PCDH1Q08174 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH1Q08174 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH1Q08174 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH1Q08174 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PCDH1Q08174 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
PCDH1Q08174 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PCDH1Q08174 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDH1Q08174 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDH1Q08174 FAM35DP-201ENST00000323387 2712 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms