Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 RNU4-75P-201ENST00000364621 146 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 RNU6-1222P-201ENST00000384615 107 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 RNU2-16P-201ENST00000410712 136 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AL445685.2-201ENST00000422551 342 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 VN1R108P-201ENST00000431580 830 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 HMGN2P3-201ENST00000433603 273 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 HMGN2P5-201ENST00000436882 273 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.45□□□□□ -2.02
CALD1Q05682 AC013470.1-201ENST00000453438 462 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.45□□□□□ -2.02
CALD1Q05682 RNU6-965P-201ENST00000516721 96 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AC069113.1-201ENST00000517763 267 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.45□□□□□ -2.02
CALD1Q05682 AC107953.1-201ENST00000522216 297 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AC104383.1-201ENST00000530297 370 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AP003034.1-201ENST00000534621 422 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AP000763.2-201ENST00000540641 163 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AC110588.1-201ENST00000559699 137 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AL158827.2-201ENST00000602494 330 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 SNRPGP19-201ENST00000603826 189 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AC063943.3-201ENST00000615562 356 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 AL691447.3-201ENST00000635020 330 ntBASIC2.45□□□□□ -2.02
CALD1Q05682 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CALD1Q05682 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
CALD1Q05682 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CALD1Q05682 MIR583-201ENST00000384846 75 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 U8.13-201ENST00000390842 128 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 SUMO2P12-201ENST00000405924 140 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 RNU2-32P-201ENST00000411193 191 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.44□□□□□ -2.02
CALD1Q05682 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.44□□□□□ -2.02
CALD1Q05682 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.44□□□□□ -2.02
CALD1Q05682 HMGB3P17-201ENST00000504195 649 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 AK3P2-201ENST00000507976 429 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 MTND3P5-201ENST00000512798 333 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 RNA5SP401-201ENST00000515920 127 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 AC024909.2-201ENST00000553035 286 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 AC007375.1-201ENST00000554513 578 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.44□□□□□ -2.02
CALD1Q05682 VN1R80P-201ENST00000597126 338 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 AL031274.2-201ENST00000599419 203 ntBASIC2.44□□□□□ -2.02
CALD1Q05682 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.44□□□□□ -2.02
CALD1Q05682 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
CALD1Q05682 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
CALD1Q05682 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.43□□□□□ -2.02
CALD1Q05682 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
CALD1Q05682 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
CALD1Q05682 MTCO3P40-201ENST00000392516 676 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 CALM2P3-201ENST00000400429 449 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 RNU2-20P-201ENST00000410425 191 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 AC016907.1-201ENST00000419483 435 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 RPS15AP10-201ENST00000432472 382 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 DNAJC19P4-201ENST00000440115 345 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.43□□□□□ -2.02
CALD1Q05682 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.43□□□□□ -2.02
CALD1Q05682 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.43□□□□□ -2.02
CALD1Q05682 MTCO3P38-201ENST00000468910 766 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 RPL23AP42-201ENST00000471152 471 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 AC083798.1-201ENST00000472671 131 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 RNU5F-2P-201ENST00000516066 82 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 RN7SKP256-201ENST00000517201 314 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 SNORA31.25-201ENST00000517242 134 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 AL118558.2-201ENST00000556294 238 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 BNIP3P16-201ENST00000589779 534 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 AC080013.6-201ENST00000606185 215 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 AC124864.2-201ENST00000624736 186 ntBASIC2.43□□□□□ -2.02
CALD1Q05682 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.43□□□□□ -2.02
CALD1Q05682 RNU6-1322P-201ENST00000364309 107 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 RNU4-20P-201ENST00000365601 151 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 SNORA69-201ENST00000383895 132 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 MIR29B2-201ENST00000385055 81 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 SNORD73A-201ENST00000386062 65 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 RNU6-780P-201ENST00000391030 104 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 RNU2-48P-201ENST00000410694 191 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 DLGAP5P1-201ENST00000430307 464 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.42□□□□□ -2.02
CALD1Q05682 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.42□□□□□ -2.02
CALD1Q05682 SRRM1P2-201ENST00000464531 1192 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 RPL21P99-201ENST00000480369 423 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.42□□□□□ -2.02
CALD1Q05682 AC107401.1-201ENST00000503426 685 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 AC079140.5-201ENST00000507882 310 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 COPS8P3-201ENST00000526024 482 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 CYCSP27-201ENST00000527643 293 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.42□□□□□ -2.02
CALD1Q05682 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CALD1Q05682 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CALD1Q05682 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CALD1Q05682 RNU6-1285P-201ENST00000363480 105 ntBASIC2.41□□□□□ -2.02
CALD1Q05682 Y_RNA.194-201ENST00000363985 102 ntBASIC2.41□□□□□ -2.02
CALD1Q05682 RNU4-66P-201ENST00000365199 138 ntBASIC2.41□□□□□ -2.02
CALD1Q05682 RNU6-546P-201ENST00000383991 107 ntBASIC2.41□□□□□ -2.02
CALD1Q05682 RNU6-43P-201ENST00000384302 107 ntBASIC2.41□□□□□ -2.02
CALD1Q05682 Y_RNA.597-201ENST00000410463 100 ntBASIC2.41□□□□□ -2.02
CALD1Q05682 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.41□□□□□ -2.02
CALD1Q05682 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.41□□□□□ -2.02
CALD1Q05682 TPTE2P5-203ENST00000458118 728 ntBASIC2.41□□□□□ -2.02
CALD1Q05682 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.41□□□□□ -2.02
CALD1Q05682 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.41□□□□□ -2.02
CALD1Q05682 AC025165.5-201ENST00000602802 578 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms