Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 USP9YP28-201ENST00000435142 589 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 RPS12P2-201ENST00000439728 269 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.36□□□□□ -2.03
CDK3Q00526 RNU7-187P-201ENST00000458985 68 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 MTCO1P29-201ENST00000496868 288 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 SNORA31.15-201ENST00000516771 132 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.36□□□□□ -2.03
CDK3Q00526 AC115990.1-201ENST00000526957 301 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 HSPE1P4-201ENST00000550617 308 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 AC091544.4-201ENST00000555268 342 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.36□□□□□ -2.03
CDK3Q00526 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.36□□□□□ -2.03
CDK3Q00526 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.36□□□□□ -2.03
CDK3Q00526 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.36□□□□□ -2.03
CDK3Q00526 SNORD53-201ENST00000579969 78 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 AC011712.1-201ENST00000588959 234 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 AC023043.2-201ENST00000589678 1026 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 HMGB1P24-202ENST00000615653 685 ntBASIC2.36□□□□□ -2.03
CDK3Q00526 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.36□□□□□ -2.03
CDK3Q00526 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CDK3Q00526 snoU2_19.1-201ENST00000362361 80 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 Y_RNA.135-201ENST00000363439 95 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 Y_RNA.160-201ENST00000363677 92 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 RNU6-933P-201ENST00000384424 107 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 RNU6-95P-201ENST00000384697 107 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 RNU6-510P-201ENST00000391239 108 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 CBX3P9-201ENST00000402326 552 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 AL139095.1-201ENST00000404326 391 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 RNU4-53P-201ENST00000410828 140 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 AL645568.3-201ENST00000433683 316 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.35□□□□□ -2.03
CDK3Q00526 RBMX2P4-201ENST00000441256 376 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.35□□□□□ -2.03
CDK3Q00526 CYP2C59P-201ENST00000457790 269 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 AIG1P1-201ENST00000503376 148 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.35□□□□□ -2.03
CDK3Q00526 MTCO2P30-201ENST00000503662 364 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 AC091874.1-201ENST00000511402 339 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 CBX3P7-201ENST00000532876 502 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.35□□□□□ -2.03
CDK3Q00526 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.35□□□□□ -2.03
CDK3Q00526 MIR4658-201ENST00000584344 65 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 AL356157.2-201ENST00000605122 111 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 AC067747.1-201ENST00000608026 250 ntBASIC2.35□□□□□ -2.03
CDK3Q00526 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.35□□□□□ -2.03
CDK3Q00526 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDK3Q00526 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
CDK3Q00526 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.34□□□□□ -2.03
CDK3Q00526 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CDK3Q00526 Y_RNA.72-201ENST00000362894 103 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDK3Q00526 SNORD116-11-201ENST00000383882 92 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 BTF3L4P2-201ENST00000392798 346 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDK3Q00526 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.34□□□□□ -2.03
CDK3Q00526 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.34□□□□□ -2.03
CDK3Q00526 IFNA20P-201ENST00000436840 528 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 AC244670.1-201ENST00000436879 112 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 AL161788.1-201ENST00000441805 169 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 AL353752.1-201ENST00000454946 260 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.34□□□□□ -2.03
CDK3Q00526 AC130509.1-201ENST00000464158 433 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 RNU5F-2P-201ENST00000516066 82 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 RNU6-1088P-201ENST00000516850 104 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 AC087241.2-201ENST00000535801 324 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 AC007375.1-201ENST00000554513 578 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 AC026464.5-201ENST00000562497 722 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 AL355297.2-201ENST00000604792 129 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 AC013412.1-201ENST00000610687 192 ntBASIC2.34□□□□□ -2.03
CDK3Q00526 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CDK3Q00526 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK3Q00526 AC009541.1-201ENST00000438279 2662 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 CBX3P1-201ENST00000325243 554 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 RNU6-227P-201ENST00000362865 103 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 Y_RNA.151-201ENST00000363566 112 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 SNORA38-201ENST00000363946 132 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 RNA5SP240-201ENST00000365355 128 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 MIR521-1-201ENST00000384902 87 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 MT-TL1-201ENST00000386347 75 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDK3Q00526 RN7SKP61-201ENST00000410642 295 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 AL590135.1-201ENST00000422215 156 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 AC019205.3-201ENST00000424573 156 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 RPL23AP95-201ENST00000426806 265 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.33□□□□□ -2.04
CDK3Q00526 AC016700.2-201ENST00000446011 156 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 MTND1P11-201ENST00000456661 876 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 RNU6-329P-201ENST00000459618 107 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 RPS29P27-201ENST00000463711 170 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 RN7SL429P-201ENST00000479090 223 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK3Q00526 RN7SL489P-201ENST00000486185 223 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 RN7SL327P-201ENST00000488659 223 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 AC015911.1-201ENST00000495111 156 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 AC114801.2-201ENST00000503825 781 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 PRDX4P1-201ENST00000507189 574 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK3Q00526 AC008549.1-201ENST00000512900 643 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 RNU6-586P-201ENST00000517265 104 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms