Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RNU6-955P-201ENST00000410497 104 ntBASIC1.66□□□□□ -2.14
CBX1P83916 VN1R36P-201ENST00000414936 291 ntBASIC1.66□□□□□ -2.14
CBX1P83916 AL117339.3-201ENST00000418733 162 ntBASIC1.66□□□□□ -2.14
CBX1P83916 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.66□□□□□ -2.14
CBX1P83916 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.66□□□□□ -2.14
CBX1P83916 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.66□□□□□ -2.14
CBX1P83916 HMGN2P18-201ENST00000450680 270 ntBASIC1.66□□□□□ -2.14
CBX1P83916 C1DP4-201ENST00000455429 424 ntBASIC1.66□□□□□ -2.14
CBX1P83916 SNORA31.16-201ENST00000516773 139 ntBASIC1.66□□□□□ -2.14
CBX1P83916 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.66□□□□□ -2.14
CBX1P83916 AC091544.4-201ENST00000555268 342 ntBASIC1.66□□□□□ -2.14
CBX1P83916 SUB1P2-201ENST00000556401 297 ntBASIC1.66□□□□□ -2.14
CBX1P83916 MIR3913-1-201ENST00000577744 102 ntBASIC1.66□□□□□ -2.14
CBX1P83916 MIR3169-201ENST00000578032 83 ntBASIC1.66□□□□□ -2.14
CBX1P83916 AC068790.2-201ENST00000602601 557 ntBASIC1.66□□□□□ -2.14
CBX1P83916 RMST_6.1-201ENST00000611980 203 ntBASIC1.66□□□□□ -2.14
CBX1P83916 AC087241.4-201ENST00000612441 480 ntBASIC1.66□□□□□ -2.14
CBX1P83916 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CBX1P83916 AL590240.4-201ENST00000616908 390 ntBASIC1.66□□□□□ -2.14
CBX1P83916 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.66□□□□□ -2.14
CBX1P83916 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
CBX1P83916 RNU6-266P-201ENST00000364225 107 ntBASIC1.65□□□□□ -2.15
CBX1P83916 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CBX1P83916 SNORA3.2-201ENST00000408221 125 ntBASIC1.65□□□□□ -2.15
CBX1P83916 RN7SKP223-201ENST00000410582 62 ntBASIC1.65□□□□□ -2.15
CBX1P83916 RN7SKP61-201ENST00000410642 295 ntBASIC1.65□□□□□ -2.15
CBX1P83916 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.65□□□□□ -2.15
CBX1P83916 AC078809.1-201ENST00000427601 140 ntBASIC1.65□□□□□ -2.15
CBX1P83916 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.65□□□□□ -2.15
CBX1P83916 AK3P2-201ENST00000507976 429 ntBASIC1.65□□□□□ -2.15
CBX1P83916 AC005741.1-201ENST00000511094 432 ntBASIC1.65□□□□□ -2.15
CBX1P83916 AC107393.1-201ENST00000512403 346 ntBASIC1.65□□□□□ -2.15
CBX1P83916 AC008549.1-201ENST00000512900 643 ntBASIC1.65□□□□□ -2.15
CBX1P83916 RNVU1-2-201ENST00000516326 135 ntBASIC1.65□□□□□ -2.15
CBX1P83916 HSPE1P18-201ENST00000517602 280 ntBASIC1.65□□□□□ -2.15
CBX1P83916 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.65□□□□□ -2.15
CBX1P83916 HSPE1P4-201ENST00000550617 308 ntBASIC1.65□□□□□ -2.15
CBX1P83916 MTCO3P23-201ENST00000561363 289 ntBASIC1.65□□□□□ -2.15
CBX1P83916 AGGF1P4-201ENST00000568249 801 ntBASIC1.65□□□□□ -2.15
CBX1P83916 MIR4648-201ENST00000580107 72 ntBASIC1.65□□□□□ -2.15
CBX1P83916 MIR4285-201ENST00000581001 85 ntBASIC1.65□□□□□ -2.15
CBX1P83916 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.65□□□□□ -2.15
CBX1P83916 MIR3941-201ENST00000582572 103 ntBASIC1.65□□□□□ -2.15
CBX1P83916 AL356157.2-201ENST00000605122 111 ntBASIC1.65□□□□□ -2.15
CBX1P83916 AL356292.1-201ENST00000283110 373 ntBASIC1.64□□□□□ -2.15
CBX1P83916 SNORD32A-201ENST00000364805 84 ntBASIC1.64□□□□□ -2.15
CBX1P83916 Y_RNA.332-201ENST00000365271 113 ntBASIC1.64□□□□□ -2.15
CBX1P83916 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.64□□□□□ -2.15
CBX1P83916 MTCYBP2-201ENST00000407745 171 ntBASIC1.64□□□□□ -2.15
CBX1P83916 RPS6P15-201ENST00000431996 751 ntBASIC1.64□□□□□ -2.15
CBX1P83916 AL358934.1-201ENST00000432346 324 ntBASIC1.64□□□□□ -2.15
CBX1P83916 SNAP23P1-201ENST00000433229 246 ntBASIC1.64□□□□□ -2.15
CBX1P83916 FTH1P25-201ENST00000447665 469 ntBASIC1.64□□□□□ -2.15
CBX1P83916 AC132479.1-201ENST00000449160 144 ntBASIC1.64□□□□□ -2.15
CBX1P83916 SNRPFP3-201ENST00000457792 225 ntBASIC1.64□□□□□ -2.15
CBX1P83916 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.64□□□□□ -2.15
CBX1P83916 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.64□□□□□ -2.15
CBX1P83916 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.64□□□□□ -2.15
CBX1P83916 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
CBX1P83916 AC105417.1-201ENST00000514691 285 ntBASIC1.64□□□□□ -2.15
CBX1P83916 AC069113.1-201ENST00000517763 267 ntBASIC1.64□□□□□ -2.15
CBX1P83916 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.64□□□□□ -2.15
CBX1P83916 AP000889.1-201ENST00000530968 660 ntBASIC1.64□□□□□ -2.15
CBX1P83916 AC103996.1-201ENST00000555468 102 ntBASIC1.64□□□□□ -2.15
CBX1P83916 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.64□□□□□ -2.15
CBX1P83916 AC040904.1-201ENST00000590850 223 ntBASIC1.64□□□□□ -2.15
CBX1P83916 AC025449.1-201ENST00000603896 529 ntBASIC1.64□□□□□ -2.15
CBX1P83916 AC008536.2-201ENST00000607284 349 ntBASIC1.64□□□□□ -2.15
CBX1P83916 AC109347.2-201ENST00000610220 349 ntBASIC1.64□□□□□ -2.15
CBX1P83916 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.64□□□□□ -2.15
CBX1P83916 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CBX1P83916 ZNF680P1-201ENST00000436625 1469 ntBASIC1.63□□□□□ -2.15
CBX1P83916 LINC02555-201ENST00000563933 1951 ntBASIC1.63□□□□□ -2.15
CBX1P83916 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CBX1P83916 AC092268.1-201ENST00000342691 405 ntBASIC1.63□□□□□ -2.15
CBX1P83916 SNORD114-6-201ENST00000364393 72 ntBASIC1.63□□□□□ -2.15
CBX1P83916 RNU6-827P-201ENST00000365553 106 ntBASIC1.63□□□□□ -2.15
CBX1P83916 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CBX1P83916 RNA5SP100-201ENST00000410903 110 ntBASIC1.63□□□□□ -2.15
CBX1P83916 RNA5SP59-201ENST00000410922 110 ntBASIC1.63□□□□□ -2.15
CBX1P83916 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.63□□□□□ -2.15
CBX1P83916 MTCO2P34-201ENST00000421994 607 ntBASIC1.63□□□□□ -2.15
CBX1P83916 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.63□□□□□ -2.15
CBX1P83916 MTCO2P11-201ENST00000431069 680 ntBASIC1.63□□□□□ -2.15
CBX1P83916 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CBX1P83916 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.63□□□□□ -2.15
CBX1P83916 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.63□□□□□ -2.15
CBX1P83916 SNORA44.1-201ENST00000517031 108 ntBASIC1.63□□□□□ -2.15
CBX1P83916 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.63□□□□□ -2.15
CBX1P83916 AC087441.2-201ENST00000529141 262 ntBASIC1.63□□□□□ -2.15
CBX1P83916 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CBX1P83916 AC109446.1-201ENST00000566172 220 ntBASIC1.63□□□□□ -2.15
CBX1P83916 MIR3923-201ENST00000579521 83 ntBASIC1.63□□□□□ -2.15
CBX1P83916 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.63□□□□□ -2.15
CBX1P83916 AC010900.2-201ENST00000604508 210 ntBASIC1.63□□□□□ -2.15
CBX1P83916 AC116312.1-201ENST00000606841 314 ntBASIC1.63□□□□□ -2.15
CBX1P83916 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.63□□□□□ -2.15
CBX1P83916 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.63□□□□□ -2.15
CBX1P83916 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.63□□□□□ -2.15
CBX1P83916 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms