Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC093648.1-201ENST00000623546 606 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 MIR1248-201ENST00000629190 106 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 AC068205.3-201ENST00000636385 468 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 RNU6-512P-201ENST00000364438 103 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 RNU6-701P-201ENST00000384059 107 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.33□□□□□ -2.36
ABCA4P78363 DEFB130D-201ENST00000426866 237 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.33□□□□□ -2.36
ABCA4P78363 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.33□□□□□ -2.36
ABCA4P78363 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.33□□□□□ -2.36
ABCA4P78363 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.33□□□□□ -2.36
ABCA4P78363 MIR4667-201ENST00000578933 66 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 AL590229.1-201ENST00000603497 542 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 AC006001.4-201ENST00000622243 395 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 RNU6-505P-201ENST00000384427 107 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 RNU6-278P-201ENST00000390945 109 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 RNU4-22P-201ENST00000411058 166 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 AC016831.2-201ENST00000417179 352 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 ARL5AP1-201ENST00000418991 388 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 MTCYBP5-201ENST00000423752 1135 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 AC013262.1-201ENST00000426710 252 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 AL627311.1-201ENST00000431514 115 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.32□□□□□ -2.36
ABCA4P78363 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.32□□□□□ -2.36
ABCA4P78363 AC005094.1-201ENST00000440420 368 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 AC010631.1-201ENST00000474150 156 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 AC026414.1-201ENST00000504046 698 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 AL450270.1-201ENST00000606160 391 ntBASIC0.32□□□□□ -2.36
ABCA4P78363 SNORD95.1-201ENST00000364099 68 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 RNU6-395P-201ENST00000365662 106 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 Y_RNA.457-201ENST00000384237 111 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
ABCA4P78363 MTND4LP7-201ENST00000431728 294 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 ZFAND6P1-201ENST00000434138 605 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 OR2AQ1P-201ENST00000451972 200 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.31□□□□□ -2.36
ABCA4P78363 RNA5SP255-201ENST00000516370 107 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 AC136628.3-201ENST00000521868 290 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.31□□□□□ -2.36
ABCA4P78363 AC097372.5-201ENST00000623665 376 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
ABCA4P78363 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
ABCA4P78363 Y_RNA.99-201ENST00000363138 105 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 Y_RNA.488-201ENST00000384403 102 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.31□□□□□ -2.36
ABCA4P78363 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.31□□□□□ -2.36
ABCA4P78363 COX6CP10-201ENST00000416832 224 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 MTCYBP1-201ENST00000454315 1119 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.31□□□□□ -2.36
ABCA4P78363 AC091163.3-201ENST00000518269 1144 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.31□□□□□ -2.36
ABCA4P78363 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.31□□□□□ -2.36
ABCA4P78363 AC091489.2-201ENST00000566263 604 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 MIR3136-201ENST00000583498 78 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 AL391001.1-201ENST00000602747 715 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 CDR1-202ENST00000625883 1485 ntBASIC0.31□□□□□ -2.36
ABCA4P78363 RNU6-48P-201ENST00000384161 107 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA4P78363 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.3□□□□□ -2.36
ABCA4P78363 MTND1P30-201ENST00000441241 901 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC114981.1-201ENST00000503897 678 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA4P78363 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
ABCA4P78363 RNU5F-2P-201ENST00000516066 82 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 ZNF971P-201ENST00000562068 1249 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC137800.2-201ENST00000574375 120 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC004987.4-201ENST00000603383 338 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 MIR3976-201ENST00000606807 139 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 BX284668.6-201ENST00000606899 438 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.3□□□□□ -2.36
ABCA4P78363 AC010615.1-201ENST00000594254 1764 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 SNORA51.10-201ENST00000384418 136 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 SNORA8.3-201ENST00000384679 139 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 SNORA12-201ENST00000391162 147 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AL133475.1-201ENST00000404414 305 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.3□□□□□ -2.36
ABCA4P78363 AC010099.3-201ENST00000423896 409 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 RPS15AP10-201ENST00000432472 382 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 TIMM9P1-201ENST00000436122 256 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC003071.1-201ENST00000451219 789 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 PDCD5P2-201ENST00000507570 312 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 MTCO3P15-201ENST00000526563 574 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC018659.1-201ENST00000551083 169 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AL136520.1-202ENST00000555494 763 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC004817.2-201ENST00000561794 651 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 MIR5708-201ENST00000579723 85 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 MTCO2P2-201ENST00000591258 225 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC021171.1-201ENST00000603137 706 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 AC107304.1-201ENST00000604229 296 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 RMST_4.1-201ENST00000616886 107 ntBASIC0.3□□□□□ -2.36
ABCA4P78363 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.3□□□□□ -2.36
ABCA4P78363 RNU6-853P-201ENST00000364306 107 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 RNU6-487P-201ENST00000365430 104 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 RNU6-622P-201ENST00000384272 103 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 RNU6-296P-201ENST00000384608 107 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 RNA5SP390-201ENST00000410191 113 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms