Protein–RNA interactions for Protein: P63132

HERVK_113, Endogenous retrovirus group K member 113 Pol protein, humanhuman

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P63132 VN1R80P-201ENST00000597126 338 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 AP001330.5-201ENST00000607176 411 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.15-201ENST00000611544 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.16-201ENST00000613119 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.89□□□□□ -2.11
HERVK_113P63132 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.12-201ENST00000613778 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.9-201ENST00000615427 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.11-201ENST00000616345 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.2-201ENST00000616535 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 RN7SL853P-201ENST00000617250 223 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.3-201ENST00000617785 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.19-201ENST00000618602 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 RNU2-1-201ENST00000618664 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.6-201ENST00000619225 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.5-201ENST00000619465 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 SNORD98-201ENST00000636377 67 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 AC131280.1-202ENST00000624067 4211 ntBASIC1.89□□□□□ -2.11
HERVK_113P63132 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HERVK_113P63132 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
HERVK_113P63132 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HERVK_113P63132 RNU4-15P-201ENST00000362613 141 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 RNU6-1159P-201ENST00000362933 107 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 RNU6-1141P-201ENST00000364520 107 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 RNU6-611P-201ENST00000384276 104 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 MIR518A2-201ENST00000384966 87 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 SNORA12-201ENST00000391162 147 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 AL590556.1-201ENST00000423231 483 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 OOSP1P1-201ENST00000423265 274 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 AC096920.1-201ENST00000423991 241 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 SNAP23P1-201ENST00000433229 246 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.88□□□□□ -2.11
HERVK_113P63132 AC244670.1-201ENST00000436879 112 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HERVK_113P63132 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.88□□□□□ -2.11
HERVK_113P63132 Z83846.1-201ENST00000446798 265 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.88□□□□□ -2.11
HERVK_113P63132 TPTE2P5-203ENST00000458118 728 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 SRRM1P2-201ENST00000464531 1192 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 SNORA31.16-201ENST00000516773 139 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 AP003034.1-201ENST00000534621 422 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 AC018630.3-201ENST00000542637 96 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 HSPE1P4-201ENST00000550617 308 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.88□□□□□ -2.11
HERVK_113P63132 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.88□□□□□ -2.11
HERVK_113P63132 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 AL034555.1-201ENST00000604816 211 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 AC103591.3-201ENST00000608684 209 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HERVK_113P63132 SDR42E1P4-201ENST00000620894 481 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
HERVK_113P63132 MIR1248-201ENST00000629190 106 ntBASIC1.88□□□□□ -2.11
HERVK_113P63132 SNORD32A-201ENST00000364805 84 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 RNU4-66P-201ENST00000365199 138 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HERVK_113P63132 SNORA69-201ENST00000383895 132 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 BTF3L4P2-201ENST00000392798 346 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 SNORA11.2-201ENST00000408318 127 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.87□□□□□ -2.11
HERVK_113P63132 EIF1AXP1-201ENST00000419267 435 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 AL590135.1-201ENST00000422215 156 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 AC019205.3-201ENST00000424573 156 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.87□□□□□ -2.11
HERVK_113P63132 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.87□□□□□ -2.11
HERVK_113P63132 AC016700.2-201ENST00000446011 156 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.87□□□□□ -2.11
HERVK_113P63132 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.87□□□□□ -2.11
HERVK_113P63132 AC015911.1-201ENST00000495111 156 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 AC145146.1-201ENST00000496370 254 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 RPL38P4-201ENST00000502376 214 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 MIR449C-201ENST00000516047 92 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.87□□□□□ -2.11
HERVK_113P63132 AL118558.2-201ENST00000556294 238 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 MIR3945-201ENST00000581853 98 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.87□□□□□ -2.11
HERVK_113P63132 AC018889.1-201ENST00000605372 397 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 AC087241.4-201ENST00000612441 480 ntBASIC1.87□□□□□ -2.11
HERVK_113P63132 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.87□□□□□ -2.11
HERVK_113P63132 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HERVK_113P63132 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HERVK_113P63132 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
HERVK_113P63132 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.86□□□□□ -2.11
HERVK_113P63132 RNU6-1322P-201ENST00000364309 107 ntBASIC1.86□□□□□ -2.11
HERVK_113P63132 SNORA40.19-201ENST00000390846 128 ntBASIC1.86□□□□□ -2.11
HERVK_113P63132 MTCO3P40-201ENST00000392516 676 ntBASIC1.86□□□□□ -2.11
HERVK_113P63132 CALM2P3-201ENST00000400429 449 ntBASIC1.86□□□□□ -2.11
HERVK_113P63132 RNU4-26P-201ENST00000410270 107 ntBASIC1.86□□□□□ -2.11
HERVK_113P63132 RNA5SP450-201ENST00000411206 102 ntBASIC1.86□□□□□ -2.11
HERVK_113P63132 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.86□□□□□ -2.11
HERVK_113P63132 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.86□□□□□ -2.11
HERVK_113P63132 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.86□□□□□ -2.11
HERVK_113P63132 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.86□□□□□ -2.11
HERVK_113P63132 AC083798.1-201ENST00000472671 131 ntBASIC1.86□□□□□ -2.11
HERVK_113P63132 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms