Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.14□□□□□ -2.39
CKS1BP61024 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.14□□□□□ -2.39
CKS1BP61024 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
CKS1BP61024 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 AC083799.1-201ENST00000366451 910 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
CKS1BP61024 SNORA32.2-201ENST00000384049 122 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 SNORA75B-201ENST00000384053 137 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 SNORA12-201ENST00000391162 147 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 MIR1276-201ENST00000408707 83 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 RPL23AP95-201ENST00000426806 265 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 AL627311.1-201ENST00000431514 115 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.13□□□□□ -2.39
CKS1BP61024 snoU109.2-201ENST00000459316 135 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 AC104982.1-201ENST00000478775 574 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 RPS26P48-201ENST00000491713 339 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
CKS1BP61024 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.13□□□□□ -2.39
CKS1BP61024 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.13□□□□□ -2.39
CKS1BP61024 AC021451.1-201ENST00000523498 1129 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.13□□□□□ -2.39
CKS1BP61024 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.13□□□□□ -2.39
CKS1BP61024 MIR4452-201ENST00000583004 71 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 AL512605.2-201ENST00000592972 256 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 AL353778.1-201ENST00000603149 408 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 AL360219.1-201ENST00000610230 366 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 AC009509.4-201ENST00000619202 509 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 MIR6513-201ENST00000621188 64 ntBASIC0.13□□□□□ -2.39
CKS1BP61024 AC068700.1-201ENST00000565862 3754 ntBASIC0.12□□□□□ -2.39
CKS1BP61024 MIR412-201ENST00000362142 91 ntBASIC0.12□□□□□ -2.39
CKS1BP61024 FCF1P10-201ENST00000407590 479 ntBASIC0.12□□□□□ -2.39
CKS1BP61024 AC068533.2-201ENST00000411872 306 ntBASIC0.12□□□□□ -2.39
CKS1BP61024 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.12□□□□□ -2.39
CKS1BP61024 TPRKBP1-201ENST00000456243 481 ntBASIC0.12□□□□□ -2.39
CKS1BP61024 AL122001.1-201ENST00000457027 370 ntBASIC0.12□□□□□ -2.39
CKS1BP61024 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.12□□□□□ -2.39
CKS1BP61024 RNU6-1225P-201ENST00000516336 65 ntBASIC0.12□□□□□ -2.39
CKS1BP61024 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.12□□□□□ -2.39
CKS1BP61024 MIR3136-201ENST00000583498 78 ntBASIC0.12□□□□□ -2.39
CKS1BP61024 KC877982.1-201ENST00000602313 470 ntBASIC0.12□□□□□ -2.39
CKS1BP61024 AC090186.1-201ENST00000605991 572 ntBASIC0.12□□□□□ -2.39
CKS1BP61024 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.12□□□□□ -2.39
CKS1BP61024 CASC19-280ENST00000642102 1351 ntBASIC0.11□□□□□ -2.39
CKS1BP61024 SNORA72.2-201ENST00000365028 127 ntBASIC0.11□□□□□ -2.39
CKS1BP61024 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.11□□□□□ -2.39
CKS1BP61024 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.11□□□□□ -2.39
CKS1BP61024 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.11□□□□□ -2.39
CKS1BP61024 NDUFB1P2-201ENST00000449477 176 ntBASIC0.11□□□□□ -2.39
CKS1BP61024 RNU6-150P-201ENST00000516237 95 ntBASIC0.11□□□□□ -2.39
CKS1BP61024 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.11□□□□□ -2.39
CKS1BP61024 AC007834.2-201ENST00000536310 343 ntBASIC0.11□□□□□ -2.39
CKS1BP61024 MIR4781-201ENST00000585250 76 ntBASIC0.11□□□□□ -2.39
CKS1BP61024 AC017083.3-201ENST00000609955 700 ntBASIC0.11□□□□□ -2.39
CKS1BP61024 AL353149.1-201ENST00000610667 244 ntBASIC0.11□□□□□ -2.39
CKS1BP61024 GHRLOS.1-201ENST00000610995 70 ntBASIC0.11□□□□□ -2.39
CKS1BP61024 MIRLET7D-201ENST00000362263 87 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 RNU4-15P-201ENST00000362613 141 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 RNU6-853P-201ENST00000364306 107 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 RNU6-1327P-201ENST00000365302 105 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 RNU6-163P-201ENST00000384396 106 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 MIR1305-201ENST00000408300 86 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.1□□□□□ -2.39
CKS1BP61024 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.1□□□□□ -2.39
CKS1BP61024 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.1□□□□□ -2.39
CKS1BP61024 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.1□□□□□ -2.39
CKS1BP61024 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.1□□□□□ -2.39
CKS1BP61024 AL603825.1-201ENST00000438481 80 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 RPEP5-201ENST00000441137 268 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 ART2BP-201ENST00000453501 499 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 RNU7-90P-201ENST00000459216 62 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 AC092991.1-201ENST00000477176 376 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 AC108740.1-201ENST00000498629 225 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 SNORA68.3-201ENST00000515906 83 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 SNORA43.2-201ENST00000516652 128 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 AC115990.1-201ENST00000526957 301 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.1□□□□□ -2.39
CKS1BP61024 AC025627.3-201ENST00000582078 182 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 AC069545.1-201ENST00000605671 358 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 AC022893.3-201ENST00000607665 437 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 MTND5P33-201ENST00000571250 1450 ntBASIC0.1□□□□□ -2.39
CKS1BP61024 SNORD56.1-201ENST00000362913 68 ntBASIC0.09□□□□□ -2.4
CKS1BP61024 SNORA25.9-201ENST00000365087 128 ntBASIC0.09□□□□□ -2.4
CKS1BP61024 SNORA16.2-201ENST00000390991 127 ntBASIC0.09□□□□□ -2.4
CKS1BP61024 SNORA12.2-201ENST00000391040 156 ntBASIC0.09□□□□□ -2.4
CKS1BP61024 RNA5SP247-201ENST00000411181 105 ntBASIC0.09□□□□□ -2.4
CKS1BP61024 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.09□□□□□ -2.4
CKS1BP61024 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.09□□□□□ -2.4
CKS1BP61024 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.09□□□□□ -2.4
CKS1BP61024 RNU7-21P-201ENST00000459430 62 ntBASIC0.09□□□□□ -2.4
CKS1BP61024 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.09□□□□□ -2.4
CKS1BP61024 SUMO2P5-201ENST00000506790 245 ntBASIC0.09□□□□□ -2.4
CKS1BP61024 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.09□□□□□ -2.4
CKS1BP61024 MIR5695-201ENST00000579717 85 ntBASIC0.09□□□□□ -2.4
CKS1BP61024 AL138889.2-201ENST00000603883 242 ntBASIC0.09□□□□□ -2.4
CKS1BP61024 AC008147.4-201ENST00000617570 1204 ntBASIC0.09□□□□□ -2.4
CKS1BP61024 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
CKS1BP61024 MIR216A-201ENST00000385063 110 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 SNORD99-201ENST00000408612 74 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms