Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 Y_RNA.31-201ENST00000362574 102 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 SNORA63-201ENST00000363450 132 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.93□□□□□ -1.94
SUMO3P55854 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.93□□□□□ -1.94
SUMO3P55854 MIR32-201ENST00000384965 70 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 MIR34B-201ENST00000385076 84 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 MIR153-2-201ENST00000385225 87 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 MIR190B-201ENST00000401119 79 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 MRPS18CP6-201ENST00000423587 223 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 AC092423.1-201ENST00000430165 186 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 MTCO3P29-201ENST00000432119 779 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.93□□□□□ -1.94
SUMO3P55854 AP000705.1-201ENST00000454567 350 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 AL353752.1-201ENST00000454946 260 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.93□□□□□ -1.94
SUMO3P55854 AC091153.1-201ENST00000466297 402 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 AL163540.1-201ENST00000485382 386 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.93□□□□□ -1.94
SUMO3P55854 RNA5SP217-201ENST00000515959 91 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 RN7SKP282-201ENST00000516824 299 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 Y_RNA.706-201ENST00000516933 99 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 Y_RNA.711-201ENST00000516993 102 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.93□□□□□ -1.94
SUMO3P55854 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.93□□□□□ -1.94
SUMO3P55854 MIR2682-201ENST00000580305 110 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 AC105245.1-201ENST00000581934 244 ntBASIC2.93□□□□□ -1.94
SUMO3P55854 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.93□□□□□ -1.94
SUMO3P55854 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SUMO3P55854 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
SUMO3P55854 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SUMO3P55854 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SUMO3P55854 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.92□□□□□ -1.94
SUMO3P55854 RNU4-15P-201ENST00000362613 141 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 RNU6-137P-201ENST00000363680 108 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 Y_RNA.202-201ENST00000364083 110 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 RNU6-461P-201ENST00000364195 107 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 Y_RNA.314-201ENST00000365114 102 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 Y_RNA.496-201ENST00000384444 101 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 AL357075.1-201ENST00000404107 726 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 RPL32P35-201ENST00000415214 394 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.92□□□□□ -1.94
SUMO3P55854 AC006028.1-201ENST00000438379 402 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.92□□□□□ -1.94
SUMO3P55854 RN7SL807P-201ENST00000470923 297 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 AC140059.1-201ENST00000489238 361 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 AC105758.1-201ENST00000506038 399 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 AC023141.11-201ENST00000508864 202 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 SNORA64.4-201ENST00000516632 81 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 RNU6-1198P-201ENST00000516904 67 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 RNU6-988P-201ENST00000519081 107 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 AC144568.1-201ENST00000520139 137 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 AC104027.1-201ENST00000521887 300 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.92□□□□□ -1.94
SUMO3P55854 MIR3944-201ENST00000581277 108 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 AL670379.2-201ENST00000604983 252 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 AL355802.3-201ENST00000607571 545 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 uc_338.25-201ENST00000613756 156 ntBASIC2.92□□□□□ -1.94
SUMO3P55854 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SUMO3P55854 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SUMO3P55854 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.92□□□□□ -1.94
SUMO3P55854 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SUMO3P55854 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SUMO3P55854 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.91□□□□□ -1.94
SUMO3P55854 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SUMO3P55854 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SUMO3P55854 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SUMO3P55854 AC069528.2-201ENST00000624849 1991 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 SNORA63.1-201ENST00000362493 131 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 RNU1-72P-201ENST00000362976 153 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 U8.10-201ENST00000384260 133 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 RNA5SP201-201ENST00000410316 124 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 snoU13.6-201ENST00000458785 104 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.91□□□□□ -1.94
SUMO3P55854 SCARNA20.6-201ENST00000517251 106 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 RN7SKP295-201ENST00000517264 153 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.91□□□□□ -1.94
SUMO3P55854 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.91□□□□□ -1.94
SUMO3P55854 AL138963.2-201ENST00000605137 226 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 MIR92B-201ENST00000607575 96 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 MIR1244-1-201ENST00000612829 85 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 MIR1244-3-201ENST00000635744 85 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 MIR1244-2-201ENST00000636449 85 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 MIR1244-4-202ENST00000636813 85 ntBASIC2.91□□□□□ -1.94
SUMO3P55854 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.91□□□□□ -1.94
SUMO3P55854 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.91□□□□□ -1.94
SUMO3P55854 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
SUMO3P55854 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
SUMO3P55854 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
SUMO3P55854 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SUMO3P55854 snoU2_19.1-201ENST00000362361 80 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 Y_RNA.326-201ENST00000365176 113 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 RNU6-805P-201ENST00000365643 106 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 RNY1P14-201ENST00000384426 108 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 MIR627-201ENST00000384979 97 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 MIR29B2-201ENST00000385055 81 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 RNU6-308P-201ENST00000390957 107 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 RNA5SP171-201ENST00000391071 115 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 AL590004.1-201ENST00000405321 300 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 RN7SKP220-201ENST00000410611 288 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 RNA5SP120-201ENST00000410900 112 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms