Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNU6-790P-201ENST00000384479 105 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 RNU6-1072P-201ENST00000384703 107 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 RNU6-443P-201ENST00000384780 107 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 MIR561-201ENST00000385216 97 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 MT-TD-201ENST00000387419 68 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 AL590556.1-201ENST00000423231 483 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.71□□□□□ -1.98
NR1H2P55055 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.71□□□□□ -1.98
NR1H2P55055 PCMTD1P1-201ENST00000455560 355 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 AC090096.1-201ENST00000489168 390 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 FGF7P4-201ENST00000509595 295 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 MTND3P22-201ENST00000510932 243 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.71□□□□□ -1.98
NR1H2P55055 RNU6-612P-201ENST00000516909 102 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 SNORA48.11-201ENST00000517015 89 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 RNU1-54P-201ENST00000517181 120 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 AP005902.1-201ENST00000521358 186 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 IMMP1LP2-201ENST00000552954 492 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 MIR3136-201ENST00000583498 78 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 POLR3GP2-201ENST00000588366 668 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 AC006023.1-201ENST00000603944 259 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.71□□□□□ -1.98
NR1H2P55055 HMGB1P24-202ENST00000615653 685 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 AC009233.1-201ENST00000616477 371 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 AC104985.2-201ENST00000620598 500 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NR1H2P55055 MIR1302-1-201ENST00000637932 143 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.71□□□□□ -1.98
NR1H2P55055 MAPK10-266ENST00000641066 6555 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.7□□□□□ -1.98
NR1H2P55055 RNA5SP125-201ENST00000364843 120 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 RNU6-692P-201ENST00000384496 107 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 MIR517A-201ENST00000385001 87 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NR1H2P55055 RNU4-14P-201ENST00000410858 122 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 AIMP1P2-201ENST00000425294 312 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.7□□□□□ -1.98
NR1H2P55055 Y_RNA.635-201ENST00000459041 101 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.7□□□□□ -1.98
NR1H2P55055 AIG1P1-201ENST00000503376 148 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 RNU6-277P-201ENST00000516272 106 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 CPDP1-201ENST00000579660 283 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.7□□□□□ -1.98
NR1H2P55055 AL117336.2-201ENST00000602435 335 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 AL713866.2-201ENST00000603579 219 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 AC016727.1-205ENST00000605437 569 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 AC124303.1-201ENST00000605703 360 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 MIR3976-201ENST00000606807 139 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 AL133215.3-201ENST00000609801 448 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 AC007318.2-201ENST00000620999 243 ntBASIC2.7□□□□□ -1.98
NR1H2P55055 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NR1H2P55055 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NR1H2P55055 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.69□□□□□ -1.98
NR1H2P55055 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NR1H2P55055 AC073325.2-201ENST00000339545 159 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 AC092268.1-201ENST00000342691 405 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 RNU1-72P-201ENST00000362976 153 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 RNU4-73P-201ENST00000363164 141 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 RNU6-1285P-201ENST00000363480 105 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 DEFA7P-201ENST00000382676 285 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 MIR521-1-201ENST00000384902 87 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 BTF3L4P2-201ENST00000392798 346 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 RN7SKP61-201ENST00000410642 295 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 AP000275.1-201ENST00000411943 390 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 Z82205.1-201ENST00000428456 297 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 MTND3P9-201ENST00000429526 346 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 AC107083.1-201ENST00000439643 279 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.69□□□□□ -1.98
NR1H2P55055 AC090515.1-201ENST00000465295 476 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 AC016632.1-201ENST00000503994 196 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 AC116337.1-201ENST00000509680 687 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.69□□□□□ -1.98
NR1H2P55055 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.69□□□□□ -1.98
NR1H2P55055 AL355375.2-201ENST00000574825 175 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 AP001836.1-201ENST00000604675 523 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 AC113139.1-201ENST00000605049 239 ntBASIC2.69□□□□□ -1.98
NR1H2P55055 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.69□□□□□ -1.98
NR1H2P55055 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NR1H2P55055 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
NR1H2P55055 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NR1H2P55055 Z82195.2-201ENST00000612348 18351 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 MIR449A-201ENST00000362113 91 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 RNU6-301P-201ENST00000384277 107 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 RNU6-43P-201ENST00000384302 107 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 RNU6-601P-201ENST00000384540 107 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NR1H2P55055 HMGN2P35-201ENST00000412164 270 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 SUMO1P4-201ENST00000429430 302 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 AC244670.1-201ENST00000436879 112 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.68□□□□□ -1.98
NR1H2P55055 SNRPGP7-201ENST00000469016 106 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.68□□□□□ -1.98
NR1H2P55055 PTP4A1P4-201ENST00000512479 322 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 AC093027.1-201ENST00000546698 429 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 AC093249.1-201ENST00000567049 203 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.68□□□□□ -1.98
NR1H2P55055 MIR3605-201ENST00000583214 100 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms