Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LIMK1P53667 Y_RNA.554-201ENST00000384672 102 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 MIR1287-201ENST00000408492 90 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 MTCO1P21-201ENST00000416634 589 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.37□□□□□ -2.03
LIMK1P53667 AC008267.5-201ENST00000424928 265 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.37□□□□□ -2.03
LIMK1P53667 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.37□□□□□ -2.03
LIMK1P53667 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.37□□□□□ -2.03
LIMK1P53667 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.37□□□□□ -2.03
LIMK1P53667 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.37□□□□□ -2.03
LIMK1P53667 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.37□□□□□ -2.03
LIMK1P53667 RPS27P21-201ENST00000486977 252 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 AC087854.1-201ENST00000519706 414 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 AC109635.3-201ENST00000529536 185 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 AP000763.2-201ENST00000540641 163 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 AL118558.2-201ENST00000556294 238 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 MIR4498-201ENST00000577599 66 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 MIR4529-201ENST00000578110 78 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 AC068790.6-201ENST00000602558 258 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 AC103705.1-201ENST00000619013 241 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 MIR1291-201ENST00000627649 87 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 AC068137.3-201ENST00000639191 341 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LIMK1P53667 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LIMK1P53667 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.36□□□□□ -2.03
LIMK1P53667 RNU6-336P-201ENST00000364891 107 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 RNU6-1222P-201ENST00000384615 107 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 Y_RNA.573-201ENST00000384763 105 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 RPL23AP36-201ENST00000413895 458 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 ERLEC1P1-201ENST00000433806 578 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 AC007969.2-201ENST00000441891 191 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 AC009238.1-201ENST00000442165 424 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 AC009237.6-201ENST00000446969 424 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 RPL38P4-201ENST00000502376 214 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.36□□□□□ -2.03
LIMK1P53667 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.36□□□□□ -2.03
LIMK1P53667 SNORA19.2-201ENST00000516013 114 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 RNU6-586P-201ENST00000517265 104 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.36□□□□□ -2.03
LIMK1P53667 AC093249.1-201ENST00000567049 203 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
LIMK1P53667 AC009233.1-201ENST00000616477 371 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LIMK1P53667 MTND5P6-201ENST00000422338 1798 ntBASIC2.36□□□□□ -2.03
LIMK1P53667 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
LIMK1P53667 AC027514.1-201ENST00000588561 1603 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 RNU6-1210P-201ENST00000363775 107 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 MIR17-201ENST00000385012 84 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 SNORD73A-201ENST00000386062 65 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LIMK1P53667 SNORA26.9-201ENST00000391322 122 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 RNU6-908P-201ENST00000410160 94 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.35□□□□□ -2.03
LIMK1P53667 AIMP1P2-201ENST00000425294 312 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 AC243964.1-201ENST00000441814 261 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 RNU6-1208P-201ENST00000459588 107 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.35□□□□□ -2.03
LIMK1P53667 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.35□□□□□ -2.03
LIMK1P53667 AC108729.3-201ENST00000513484 108 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 RNU6-1053P-201ENST00000515930 101 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 SNORA31.25-201ENST00000517242 134 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.35□□□□□ -2.03
LIMK1P53667 AC025423.5-201ENST00000550230 219 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.35□□□□□ -2.03
LIMK1P53667 MIR5092-201ENST00000583139 88 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.35□□□□□ -2.03
LIMK1P53667 RNU6-89P-201ENST00000606519 100 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 AC046143.2-201ENST00000609789 160 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 U4.5-201ENST00000617137 123 ntBASIC2.35□□□□□ -2.03
LIMK1P53667 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.35□□□□□ -2.03
LIMK1P53667 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
LIMK1P53667 RNU6-877P-201ENST00000383868 107 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 Y_RNA.453-201ENST00000384223 109 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 RNU6-692P-201ENST00000384496 107 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 EIF4E2P1-201ENST00000393781 255 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 U3.40-201ENST00000408706 208 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.34□□□□□ -2.03
LIMK1P53667 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.34□□□□□ -2.03
LIMK1P53667 C8orf59P1-201ENST00000429930 303 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 RPS15AP10-201ENST00000432472 382 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 USP9YP8-201ENST00000441913 500 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.34□□□□□ -2.03
LIMK1P53667 AC055731.1-201ENST00000474387 401 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 AL121594.1-201ENST00000475906 575 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.34□□□□□ -2.03
LIMK1P53667 AC083904.1-201ENST00000487828 231 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 RNU2-19P-201ENST00000517288 84 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 AC078814.3-201ENST00000553036 491 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.34□□□□□ -2.03
LIMK1P53667 TPRKBP2-201ENST00000565969 475 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 BNIP3P16-201ENST00000589779 534 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 AL713866.2-201ENST00000603579 219 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 AC073869.6-201ENST00000640656 341 ntBASIC2.34□□□□□ -2.03
LIMK1P53667 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LIMK1P53667 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LIMK1P53667 AL356292.1-201ENST00000283110 373 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 Y_RNA.6-201ENST00000362350 114 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 snoU2_19.1-201ENST00000362361 80 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 Y_RNA.40-201ENST00000362645 93 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms