Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 UBE2V2P2-201ENST00000587677 504 ntBASIC2.96□□□□□ -1.94
NEK3P51956 HMGB1P24-202ENST00000615653 685 ntBASIC2.96□□□□□ -1.94
NEK3P51956 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NEK3P51956 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NEK3P51956 AC096644.4-201ENST00000563417 2912 ntBASIC2.96□□□□□ -1.94
NEK3P51956 RNU1-35P-201ENST00000362782 153 ntBASIC2.95□□□□□ -1.94
NEK3P51956 Y_RNA.111-201ENST00000363248 100 ntBASIC2.95□□□□□ -1.94
NEK3P51956 Y_RNA.123-201ENST00000363338 102 ntBASIC2.95□□□□□ -1.94
NEK3P51956 MTCYBP2-201ENST00000407745 171 ntBASIC2.95□□□□□ -1.94
NEK3P51956 SNORD88.1-201ENST00000408684 91 ntBASIC2.95□□□□□ -1.94
NEK3P51956 RN7SKP158-201ENST00000410453 326 ntBASIC2.95□□□□□ -1.94
NEK3P51956 HMGB1P18-201ENST00000438801 619 ntBASIC2.95□□□□□ -1.94
NEK3P51956 AC103975.1-201ENST00000482506 483 ntBASIC2.95□□□□□ -1.94
NEK3P51956 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.95□□□□□ -1.94
NEK3P51956 HMGN1P12-201ENST00000499125 195 ntBASIC2.95□□□□□ -1.94
NEK3P51956 AC091874.1-201ENST00000511402 339 ntBASIC2.95□□□□□ -1.94
NEK3P51956 AC023043.3-201ENST00000593113 385 ntBASIC2.95□□□□□ -1.94
NEK3P51956 MIR3976-201ENST00000606807 139 ntBASIC2.95□□□□□ -1.94
NEK3P51956 AC005520.5-201ENST00000613926 164 ntBASIC2.95□□□□□ -1.94
NEK3P51956 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.95□□□□□ -1.94
NEK3P51956 AC137590.2-201ENST00000619709 240 ntBASIC2.95□□□□□ -1.94
NEK3P51956 AL450472.1-202ENST00000637286 180 ntBASIC2.95□□□□□ -1.94
NEK3P51956 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NEK3P51956 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NEK3P51956 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.94□□□□□ -1.94
NEK3P51956 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.94□□□□□ -1.94
NEK3P51956 snoU2_19.1-201ENST00000362361 80 ntBASIC2.94□□□□□ -1.94
NEK3P51956 SNORA72.1-201ENST00000363485 129 ntBASIC2.94□□□□□ -1.94
NEK3P51956 Y_RNA.339-201ENST00000365325 102 ntBASIC2.94□□□□□ -1.94
NEK3P51956 MIR181A2-201ENST00000384863 110 ntBASIC2.94□□□□□ -1.94
NEK3P51956 PDCL2P1-201ENST00000419302 352 ntBASIC2.94□□□□□ -1.94
NEK3P51956 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.94□□□□□ -1.94
NEK3P51956 AL513124.1-201ENST00000450410 614 ntBASIC2.94□□□□□ -1.94
NEK3P51956 SNORA31.16-201ENST00000516773 139 ntBASIC2.94□□□□□ -1.94
NEK3P51956 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NEK3P51956 AL121579.1-201ENST00000555129 305 ntBASIC2.94□□□□□ -1.94
NEK3P51956 MIR548S-201ENST00000581352 82 ntBASIC2.94□□□□□ -1.94
NEK3P51956 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.94□□□□□ -1.94
NEK3P51956 Z98751.3-201ENST00000604447 521 ntBASIC2.94□□□□□ -1.94
NEK3P51956 AL355073.2-201ENST00000612106 557 ntBASIC2.94□□□□□ -1.94
NEK3P51956 AL133216.2-202ENST00000634512 349 ntBASIC2.94□□□□□ -1.94
NEK3P51956 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NEK3P51956 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.94□□□□□ -1.94
NEK3P51956 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NEK3P51956 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
NEK3P51956 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.93□□□□□ -1.94
NEK3P51956 RNU4-15P-201ENST00000362613 141 ntBASIC2.93□□□□□ -1.94
NEK3P51956 SNORD81.2-201ENST00000365153 76 ntBASIC2.93□□□□□ -1.94
NEK3P51956 RNU6-968P-201ENST00000384076 107 ntBASIC2.93□□□□□ -1.94
NEK3P51956 RNU6-1274P-201ENST00000384557 107 ntBASIC2.93□□□□□ -1.94
NEK3P51956 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
NEK3P51956 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.93□□□□□ -1.94
NEK3P51956 AC012306.1-201ENST00000423267 114 ntBASIC2.93□□□□□ -1.94
NEK3P51956 RPL21P2-201ENST00000440049 481 ntBASIC2.93□□□□□ -1.94
NEK3P51956 MTND4P18-201ENST00000447010 465 ntBASIC2.93□□□□□ -1.94
NEK3P51956 SNORD5.1-201ENST00000458800 75 ntBASIC2.93□□□□□ -1.94
NEK3P51956 AC132942.1-201ENST00000486753 483 ntBASIC2.93□□□□□ -1.94
NEK3P51956 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.93□□□□□ -1.94
NEK3P51956 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.93□□□□□ -1.94
NEK3P51956 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NEK3P51956 AC005730.3-201ENST00000583067 366 ntBASIC2.93□□□□□ -1.94
NEK3P51956 AL033523.1-201ENST00000605153 153 ntBASIC2.93□□□□□ -1.94
NEK3P51956 AC090115.4-201ENST00000609970 188 ntBASIC2.93□□□□□ -1.94
NEK3P51956 AC025253.1-201ENST00000613623 543 ntBASIC2.93□□□□□ -1.94
NEK3P51956 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.93□□□□□ -1.94
NEK3P51956 AC099654.5-201ENST00000636479 350 ntBASIC2.93□□□□□ -1.94
NEK3P51956 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NEK3P51956 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.92□□□□□ -1.94
NEK3P51956 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.92□□□□□ -1.94
NEK3P51956 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.92□□□□□ -1.94
NEK3P51956 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
NEK3P51956 Y_RNA.482-201ENST00000384377 111 ntBASIC2.92□□□□□ -1.94
NEK3P51956 MIR548F5-201ENST00000408421 86 ntBASIC2.92□□□□□ -1.94
NEK3P51956 RNA5SP201-201ENST00000410316 124 ntBASIC2.92□□□□□ -1.94
NEK3P51956 RPL37P10-201ENST00000412884 288 ntBASIC2.92□□□□□ -1.94
NEK3P51956 RPS26P42-201ENST00000413485 326 ntBASIC2.92□□□□□ -1.94
NEK3P51956 AC009238.1-201ENST00000442165 424 ntBASIC2.92□□□□□ -1.94
NEK3P51956 AL135938.1-201ENST00000443141 297 ntBASIC2.92□□□□□ -1.94
NEK3P51956 AC009237.6-201ENST00000446969 424 ntBASIC2.92□□□□□ -1.94
NEK3P51956 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.92□□□□□ -1.94
NEK3P51956 AC008571.1-201ENST00000467232 300 ntBASIC2.92□□□□□ -1.94
NEK3P51956 RNU6-1016P-201ENST00000516689 94 ntBASIC2.92□□□□□ -1.94
NEK3P51956 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.92□□□□□ -1.94
NEK3P51956 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.92□□□□□ -1.94
NEK3P51956 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.92□□□□□ -1.94
NEK3P51956 MTCO3P13-201ENST00000577757 781 ntBASIC2.92□□□□□ -1.94
NEK3P51956 AL078605.1-201ENST00000603529 500 ntBASIC2.92□□□□□ -1.94
NEK3P51956 MIR6128-201ENST00000615528 109 ntBASIC2.92□□□□□ -1.94
NEK3P51956 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.92□□□□□ -1.94
NEK3P51956 TPTEP1-208ENST00000636884 213 ntBASIC2.92□□□□□ -1.94
NEK3P51956 AC233981.2-201ENST00000611524 1614 ntBASIC2.91□□□□□ -1.94
NEK3P51956 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
NEK3P51956 RNU5B-2P-201ENST00000363036 113 ntBASIC2.91□□□□□ -1.94
NEK3P51956 VTRNA1-1-201ENST00000363120 99 ntBASIC2.91□□□□□ -1.94
NEK3P51956 RNU6-1032P-201ENST00000384100 107 ntBASIC2.91□□□□□ -1.94
NEK3P51956 AC112220.1-201ENST00000434628 355 ntBASIC2.91□□□□□ -1.94
NEK3P51956 RPS3AP52-201ENST00000435639 297 ntBASIC2.91□□□□□ -1.94
NEK3P51956 AC092473.1-201ENST00000441098 221 ntBASIC2.91□□□□□ -1.94
NEK3P51956 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.91□□□□□ -1.94
NEK3P51956 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms