Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP11P51784 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
USP11P51784 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP11P51784 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP11P51784 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP11P51784 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
USP11P51784 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP11P51784 Y_RNA.262-201ENST00000364641 102 ntBASIC4.13□□□□□ -1.75
USP11P51784 RNU6-818P-201ENST00000364837 108 ntBASIC4.13□□□□□ -1.75
USP11P51784 SNORA73.2-201ENST00000364946 201 ntBASIC4.13□□□□□ -1.75
USP11P51784 RNU6-541P-201ENST00000384709 110 ntBASIC4.13□□□□□ -1.75
USP11P51784 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.13□□□□□ -1.75
USP11P51784 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP11P51784 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.13□□□□□ -1.75
USP11P51784 AC024067.1-201ENST00000426199 223 ntBASIC4.13□□□□□ -1.75
USP11P51784 RPL23AP95-201ENST00000426806 265 ntBASIC4.13□□□□□ -1.75
USP11P51784 GOT2P5-201ENST00000433995 546 ntBASIC4.13□□□□□ -1.75
USP11P51784 AL162725.1-201ENST00000435405 301 ntBASIC4.13□□□□□ -1.75
USP11P51784 AC124916.1-201ENST00000444020 547 ntBASIC4.13□□□□□ -1.75
USP11P51784 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.13□□□□□ -1.75
USP11P51784 RPL31P13-201ENST00000484151 370 ntBASIC4.13□□□□□ -1.75
USP11P51784 HMGB3P3-201ENST00000510526 400 ntBASIC4.13□□□□□ -1.75
USP11P51784 RN7SKP18-201ENST00000516005 275 ntBASIC4.13□□□□□ -1.75
USP11P51784 RNU6-1183P-201ENST00000517054 60 ntBASIC4.13□□□□□ -1.75
USP11P51784 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.13□□□□□ -1.75
USP11P51784 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.13□□□□□ -1.75
USP11P51784 snoU18.1-201ENST00000629629 71 ntBASIC4.13□□□□□ -1.75
USP11P51784 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP11P51784 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP11P51784 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.13□□□□□ -1.75
USP11P51784 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP11P51784 TNPO1P3-201ENST00000436471 2662 ntBASIC4.13□□□□□ -1.75
USP11P51784 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
USP11P51784 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
USP11P51784 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP11P51784 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP11P51784 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
USP11P51784 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP11P51784 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.12□□□□□ -1.75
USP11P51784 RNU4-56P-201ENST00000364700 142 ntBASIC4.12□□□□□ -1.75
USP11P51784 AL357139.1-201ENST00000407792 426 ntBASIC4.12□□□□□ -1.75
USP11P51784 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.12□□□□□ -1.75
USP11P51784 AP000873.1-201ENST00000463987 400 ntBASIC4.12□□□□□ -1.75
USP11P51784 AC106707.2-201ENST00000484182 374 ntBASIC4.12□□□□□ -1.75
USP11P51784 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.12□□□□□ -1.75
USP11P51784 RN7SKP83-201ENST00000516512 178 ntBASIC4.12□□□□□ -1.75
USP11P51784 RNU6-579P-201ENST00000516879 102 ntBASIC4.12□□□□□ -1.75
USP11P51784 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.12□□□□□ -1.75
USP11P51784 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.12□□□□□ -1.75
USP11P51784 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.12□□□□□ -1.75
USP11P51784 MIR5692C2-201ENST00000577959 77 ntBASIC4.12□□□□□ -1.75
USP11P51784 AC092628.2-201ENST00000622492 339 ntBASIC4.12□□□□□ -1.75
USP11P51784 MTND1P7-201ENST00000632801 297 ntBASIC4.12□□□□□ -1.75
USP11P51784 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.12□□□□□ -1.75
USP11P51784 AC009093.8-201ENST00000641769 292 ntBASIC4.12□□□□□ -1.75
USP11P51784 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP11P51784 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP11P51784 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP11P51784 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
USP11P51784 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.11□□□□□ -1.75
USP11P51784 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP11P51784 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP11P51784 SNORD9-201ENST00000362566 104 ntBASIC4.11□□□□□ -1.75
USP11P51784 SNORA71.3-201ENST00000362582 128 ntBASIC4.11□□□□□ -1.75
USP11P51784 SNORA70.4-201ENST00000365509 134 ntBASIC4.11□□□□□ -1.75
USP11P51784 Y_RNA.400-201ENST00000383963 111 ntBASIC4.11□□□□□ -1.75
USP11P51784 RNU6-211P-201ENST00000384047 107 ntBASIC4.11□□□□□ -1.75
USP11P51784 Y_RNA.586-201ENST00000391146 98 ntBASIC4.11□□□□□ -1.75
USP11P51784 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.11□□□□□ -1.75
USP11P51784 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.11□□□□□ -1.75
USP11P51784 RN7SL330P-201ENST00000469709 307 ntBASIC4.11□□□□□ -1.75
USP11P51784 AC026403.1-201ENST00000518938 295 ntBASIC4.11□□□□□ -1.75
USP11P51784 AP005660.1-201ENST00000522972 293 ntBASIC4.11□□□□□ -1.75
USP11P51784 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.11□□□□□ -1.75
USP11P51784 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.11□□□□□ -1.75
USP11P51784 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.11□□□□□ -1.75
USP11P51784 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.11□□□□□ -1.75
USP11P51784 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.11□□□□□ -1.75
USP11P51784 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.11□□□□□ -1.75
USP11P51784 MIR5047-201ENST00000579212 100 ntBASIC4.11□□□□□ -1.75
USP11P51784 AC005176.2-201ENST00000596933 147 ntBASIC4.11□□□□□ -1.75
USP11P51784 AC022441.3-201ENST00000605737 136 ntBASIC4.11□□□□□ -1.75
USP11P51784 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
USP11P51784 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
USP11P51784 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP11P51784 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP11P51784 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
USP11P51784 Y_RNA.343-201ENST00000365354 112 ntBASIC4.1□□□□□ -1.75
USP11P51784 RNU6-898P-201ENST00000365627 104 ntBASIC4.1□□□□□ -1.75
USP11P51784 Y_RNA.571-201ENST00000384753 98 ntBASIC4.1□□□□□ -1.75
USP11P51784 MIR449B-201ENST00000384995 97 ntBASIC4.1□□□□□ -1.75
USP11P51784 MIR607-201ENST00000385241 96 ntBASIC4.1□□□□□ -1.75
USP11P51784 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP11P51784 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.1□□□□□ -1.75
USP11P51784 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.1□□□□□ -1.75
USP11P51784 CYCSP4-201ENST00000429682 331 ntBASIC4.1□□□□□ -1.75
USP11P51784 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.1□□□□□ -1.75
USP11P51784 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.1□□□□□ -1.75
USP11P51784 SUMO2P18-201ENST00000518873 252 ntBASIC4.1□□□□□ -1.75
USP11P51784 AP004607.1-201ENST00000524456 203 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms