Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNU6-388P-201ENST00000517012 105 ntBASIC3.68□□□□□ -1.82
MRE11P49959 RNU6-389P-201ENST00000517048 105 ntBASIC3.68□□□□□ -1.82
MRE11P49959 RNA5SP165-201ENST00000517142 115 ntBASIC3.68□□□□□ -1.82
MRE11P49959 RNA5SP291-201ENST00000517222 105 ntBASIC3.68□□□□□ -1.82
MRE11P49959 AP005902.1-201ENST00000521358 186 ntBASIC3.68□□□□□ -1.82
MRE11P49959 AC005476.1-201ENST00000554427 397 ntBASIC3.68□□□□□ -1.82
MRE11P49959 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.68□□□□□ -1.82
MRE11P49959 AC125232.2-201ENST00000592457 143 ntBASIC3.68□□□□□ -1.82
MRE11P49959 RAC1P9-201ENST00000604990 392 ntBASIC3.68□□□□□ -1.82
MRE11P49959 MTND4LP5-201ENST00000605152 292 ntBASIC3.68□□□□□ -1.82
MRE11P49959 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.68□□□□□ -1.82
MRE11P49959 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
MRE11P49959 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
MRE11P49959 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MRE11P49959 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
MRE11P49959 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MRE11P49959 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
MRE11P49959 MIR422A-201ENST00000362286 90 ntBASIC3.67□□□□□ -1.82
MRE11P49959 RNU4-35P-201ENST00000362588 141 ntBASIC3.67□□□□□ -1.82
MRE11P49959 Y_RNA.222-201ENST00000364264 102 ntBASIC3.67□□□□□ -1.82
MRE11P49959 Y_RNA.526-201ENST00000384572 110 ntBASIC3.67□□□□□ -1.82
MRE11P49959 SNORA44-201ENST00000384584 132 ntBASIC3.67□□□□□ -1.82
MRE11P49959 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
MRE11P49959 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.67□□□□□ -1.82
MRE11P49959 AL139281.1-201ENST00000422120 335 ntBASIC3.67□□□□□ -1.82
MRE11P49959 ELOCP20-201ENST00000422460 345 ntBASIC3.67□□□□□ -1.82
MRE11P49959 AC007560.1-201ENST00000426912 237 ntBASIC3.67□□□□□ -1.82
MRE11P49959 AL590383.1-201ENST00000428602 75 ntBASIC3.67□□□□□ -1.82
MRE11P49959 AC092423.1-201ENST00000430165 186 ntBASIC3.67□□□□□ -1.82
MRE11P49959 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
MRE11P49959 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.67□□□□□ -1.82
MRE11P49959 RNU6-572P-201ENST00000516724 80 ntBASIC3.67□□□□□ -1.82
MRE11P49959 RNU6-711P-201ENST00000517255 106 ntBASIC3.67□□□□□ -1.82
MRE11P49959 AC109479.2-201ENST00000517842 174 ntBASIC3.67□□□□□ -1.82
MRE11P49959 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.67□□□□□ -1.82
MRE11P49959 TRAV28-201ENST00000557548 323 ntBASIC3.67□□□□□ -1.82
MRE11P49959 AC005357.1-201ENST00000588399 301 ntBASIC3.67□□□□□ -1.82
MRE11P49959 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.67□□□□□ -1.82
MRE11P49959 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
MRE11P49959 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.67□□□□□ -1.82
MRE11P49959 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.67□□□□□ -1.82
MRE11P49959 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
MRE11P49959 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
MRE11P49959 RNU4-82P-201ENST00000362443 140 ntBASIC3.66□□□□□ -1.82
MRE11P49959 SNORD50.1-201ENST00000362987 71 ntBASIC3.66□□□□□ -1.82
MRE11P49959 RNU4-50P-201ENST00000364361 141 ntBASIC3.66□□□□□ -1.82
MRE11P49959 Y_RNA.288-201ENST00000364854 92 ntBASIC3.66□□□□□ -1.82
MRE11P49959 Y_RNA.447-201ENST00000384184 113 ntBASIC3.66□□□□□ -1.82
MRE11P49959 Y_RNA.461-201ENST00000384263 103 ntBASIC3.66□□□□□ -1.82
MRE11P49959 Y_RNA.489-201ENST00000384410 101 ntBASIC3.66□□□□□ -1.82
MRE11P49959 SNORA51.11-201ENST00000384442 131 ntBASIC3.66□□□□□ -1.82
MRE11P49959 MIR34A-201ENST00000385130 110 ntBASIC3.66□□□□□ -1.82
MRE11P49959 SAR1AP2-201ENST00000392696 594 ntBASIC3.66□□□□□ -1.82
MRE11P49959 YPEL5P1-201ENST00000419731 367 ntBASIC3.66□□□□□ -1.82
MRE11P49959 AC007098.1-201ENST00000420122 367 ntBASIC3.66□□□□□ -1.82
MRE11P49959 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.66□□□□□ -1.82
MRE11P49959 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.66□□□□□ -1.82
MRE11P49959 AC092798.1-201ENST00000458542 409 ntBASIC3.66□□□□□ -1.82
MRE11P49959 AK3P2-201ENST00000507976 429 ntBASIC3.66□□□□□ -1.82
MRE11P49959 SNORA25.11-201ENST00000515935 105 ntBASIC3.66□□□□□ -1.82
MRE11P49959 RNU2-53P-201ENST00000516257 147 ntBASIC3.66□□□□□ -1.82
MRE11P49959 RNU6-612P-201ENST00000516909 102 ntBASIC3.66□□□□□ -1.82
MRE11P49959 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.66□□□□□ -1.82
MRE11P49959 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.66□□□□□ -1.82
MRE11P49959 AC023157.2-201ENST00000540596 141 ntBASIC3.66□□□□□ -1.82
MRE11P49959 AC091544.4-201ENST00000555268 342 ntBASIC3.66□□□□□ -1.82
MRE11P49959 AC090517.1-201ENST00000569307 266 ntBASIC3.66□□□□□ -1.82
MRE11P49959 AC078899.3-201ENST00000599065 212 ntBASIC3.66□□□□□ -1.82
MRE11P49959 AC093732.2-201ENST00000607950 274 ntBASIC3.66□□□□□ -1.82
MRE11P49959 AC009318.2-201ENST00000610917 651 ntBASIC3.66□□□□□ -1.82
MRE11P49959 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MRE11P49959 AC008568.2-201ENST00000623862 2313 ntBASIC3.66□□□□□ -1.82
MRE11P49959 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.66□□□□□ -1.82
MRE11P49959 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.66□□□□□ -1.82
MRE11P49959 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.65□□□□□ -1.82
MRE11P49959 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
MRE11P49959 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
MRE11P49959 Y_RNA.26-201ENST00000362539 101 ntBASIC3.65□□□□□ -1.83
MRE11P49959 RNU6-428P-201ENST00000362942 107 ntBASIC3.65□□□□□ -1.83
MRE11P49959 U8.9-201ENST00000365667 134 ntBASIC3.65□□□□□ -1.83
MRE11P49959 RNU6-1026P-201ENST00000384465 108 ntBASIC3.65□□□□□ -1.83
MRE11P49959 RNU6-700P-201ENST00000391043 107 ntBASIC3.65□□□□□ -1.83
MRE11P49959 RNU2-68P-201ENST00000410878 191 ntBASIC3.65□□□□□ -1.83
MRE11P49959 MTND3P9-201ENST00000429526 346 ntBASIC3.65□□□□□ -1.83
MRE11P49959 AL078601.1-201ENST00000444542 271 ntBASIC3.65□□□□□ -1.83
MRE11P49959 AC009237.8-201ENST00000445492 379 ntBASIC3.65□□□□□ -1.83
MRE11P49959 FCF1P4-201ENST00000448326 183 ntBASIC3.65□□□□□ -1.83
MRE11P49959 AC107222.1-201ENST00000510899 637 ntBASIC3.65□□□□□ -1.83
MRE11P49959 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.65□□□□□ -1.83
MRE11P49959 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.65□□□□□ -1.83
MRE11P49959 RNU6-911P-201ENST00000516523 104 ntBASIC3.65□□□□□ -1.83
MRE11P49959 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.65□□□□□ -1.83
MRE11P49959 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.65□□□□□ -1.83
MRE11P49959 AC004805.2-201ENST00000605382 482 ntBASIC3.65□□□□□ -1.83
MRE11P49959 AC005046.1-201ENST00000608515 625 ntBASIC3.65□□□□□ -1.83
MRE11P49959 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.65□□□□□ -1.83
MRE11P49959 MIR6076-201ENST00000617521 113 ntBASIC3.65□□□□□ -1.83
MRE11P49959 AL159153.1-201ENST00000619688 317 ntBASIC3.65□□□□□ -1.83
MRE11P49959 AC007785.2-201ENST00000598627 1916 ntBASIC3.65□□□□□ -1.83
MRE11P49959 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms