Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLK1P49759 Y_RNA.579-201ENST00000390939 94 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AC096664.2-201ENST00000411843 406 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.5□□□□□ -2.01
CLK1P49759 RPL37P10-201ENST00000412884 288 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.5□□□□□ -2.01
CLK1P49759 AL590632.1-201ENST00000424289 371 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.5□□□□□ -2.01
CLK1P49759 AC087499.2-201ENST00000432861 149 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.5□□□□□ -2.01
CLK1P49759 AC107083.1-201ENST00000439643 279 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AL161788.1-201ENST00000441805 169 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AL118496.2-201ENST00000448300 230 ntBASIC2.5□□□□□ -2.01
CLK1P49759 Y_RNA.639-201ENST00000458981 102 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AC107032.1-201ENST00000485945 480 ntBASIC2.5□□□□□ -2.01
CLK1P49759 SRIP1-201ENST00000489235 288 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.5□□□□□ -2.01
CLK1P49759 RN7SKP24-201ENST00000515888 284 ntBASIC2.5□□□□□ -2.01
CLK1P49759 SNORA31.25-201ENST00000517242 134 ntBASIC2.5□□□□□ -2.01
CLK1P49759 RNU2-19P-201ENST00000517288 84 ntBASIC2.5□□□□□ -2.01
CLK1P49759 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.5□□□□□ -2.01
CLK1P49759 AL157871.3-201ENST00000557231 293 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AC020661.2-201ENST00000560114 134 ntBASIC2.5□□□□□ -2.01
CLK1P49759 MIR1273C-201ENST00000578669 77 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AC124303.1-201ENST00000605703 360 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AC096772.1-201ENST00000609146 564 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AC064836.2-201ENST00000609491 462 ntBASIC2.5□□□□□ -2.01
CLK1P49759 AC126177.8-201ENST00000618339 1015 ntBASIC2.5□□□□□ -2.01
CLK1P49759 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.5□□□□□ -2.01
CLK1P49759 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLK1P49759 AC008555.8-201ENST00000623602 2168 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RNU6-562P-201ENST00000362731 107 ntBASIC2.49□□□□□ -2.01
CLK1P49759 Y_RNA.315-201ENST00000365117 102 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RNU6-128P-201ENST00000383976 107 ntBASIC2.49□□□□□ -2.01
CLK1P49759 SNORA80E-201ENST00000384744 137 ntBASIC2.49□□□□□ -2.01
CLK1P49759 MIR128-1-201ENST00000384921 82 ntBASIC2.49□□□□□ -2.01
CLK1P49759 snosnR66.1-201ENST00000391095 99 ntBASIC2.49□□□□□ -2.01
CLK1P49759 U3.40-201ENST00000408706 208 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RNA5SP21-201ENST00000410917 96 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RNU6-370P-201ENST00000411008 104 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RNU6-1304P-201ENST00000411374 106 ntBASIC2.49□□□□□ -2.01
CLK1P49759 EDDM3CP-201ENST00000415977 425 ntBASIC2.49□□□□□ -2.01
CLK1P49759 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.49□□□□□ -2.01
CLK1P49759 AL139396.1-201ENST00000421137 167 ntBASIC2.49□□□□□ -2.01
CLK1P49759 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.49□□□□□ -2.01
CLK1P49759 AC236972.2-201ENST00000434979 310 ntBASIC2.49□□□□□ -2.01
CLK1P49759 AL135938.1-201ENST00000443141 297 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RPS3P1-201ENST00000456781 192 ntBASIC2.49□□□□□ -2.01
CLK1P49759 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.49□□□□□ -2.01
CLK1P49759 RNA5SP233-201ENST00000459153 113 ntBASIC2.49□□□□□ -2.01
CLK1P49759 AC055731.1-201ENST00000474387 401 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RPS27P27-201ENST00000498779 255 ntBASIC2.49□□□□□ -2.01
CLK1P49759 AC079140.5-201ENST00000507882 310 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RNU6-1332P-201ENST00000516666 104 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RNU6-572P-201ENST00000516724 80 ntBASIC2.49□□□□□ -2.01
CLK1P49759 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.49□□□□□ -2.01
CLK1P49759 AC009902.1-201ENST00000519351 183 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RNU6-323P-201ENST00000521915 107 ntBASIC2.49□□□□□ -2.01
CLK1P49759 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.49□□□□□ -2.01
CLK1P49759 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLK1P49759 MIR4287-201ENST00000579398 78 ntBASIC2.49□□□□□ -2.01
CLK1P49759 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.49□□□□□ -2.01
CLK1P49759 MIR3200-201ENST00000580767 85 ntBASIC2.49□□□□□ -2.01
CLK1P49759 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.49□□□□□ -2.01
CLK1P49759 AC084781.2-201ENST00000615568 161 ntBASIC2.49□□□□□ -2.01
CLK1P49759 RMST_4.1-201ENST00000616886 107 ntBASIC2.49□□□□□ -2.01
CLK1P49759 AC138627.2-201ENST00000624202 601 ntBASIC2.49□□□□□ -2.01
CLK1P49759 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLK1P49759 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.48□□□□□ -2.01
CLK1P49759 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CLK1P49759 Y_RNA.33-201ENST00000362591 102 ntBASIC2.48□□□□□ -2.01
CLK1P49759 RNU6-1188P-201ENST00000363795 107 ntBASIC2.48□□□□□ -2.01
CLK1P49759 RNU6-384P-201ENST00000364900 104 ntBASIC2.48□□□□□ -2.01
CLK1P49759 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CLK1P49759 Y_RNA.480-201ENST00000384364 102 ntBASIC2.48□□□□□ -2.01
CLK1P49759 RNU6-95P-201ENST00000384697 107 ntBASIC2.48□□□□□ -2.01
CLK1P49759 MIR561-201ENST00000385216 97 ntBASIC2.48□□□□□ -2.01
CLK1P49759 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLK1P49759 AL138827.1-201ENST00000402666 306 ntBASIC2.48□□□□□ -2.01
CLK1P49759 AL592148.1-201ENST00000413568 445 ntBASIC2.48□□□□□ -2.01
CLK1P49759 AL359672.1-201ENST00000442302 409 ntBASIC2.48□□□□□ -2.01
CLK1P49759 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.48□□□□□ -2.01
CLK1P49759 AC112771.1-201ENST00000463581 102 ntBASIC2.48□□□□□ -2.01
CLK1P49759 AC130509.1-201ENST00000464158 433 ntBASIC2.48□□□□□ -2.01
CLK1P49759 AC011005.2-201ENST00000487324 359 ntBASIC2.48□□□□□ -2.01
CLK1P49759 AC097462.2-201ENST00000504623 481 ntBASIC2.48□□□□□ -2.01
CLK1P49759 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.48□□□□□ -2.01
CLK1P49759 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CLK1P49759 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.48□□□□□ -2.01
CLK1P49759 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.48□□□□□ -2.01
CLK1P49759 AP003072.1-201ENST00000531740 145 ntBASIC2.48□□□□□ -2.01
CLK1P49759 MIR5692A1-201ENST00000580523 69 ntBASIC2.48□□□□□ -2.01
CLK1P49759 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLK1P49759 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLK1P49759 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
CLK1P49759 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLK1P49759 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.47□□□□□ -2.01
CLK1P49759 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.47□□□□□ -2.01
CLK1P49759 RNU6-7-201ENST00000364784 107 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms