Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.36□□□□□ -1.55
PRIM1P49642 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.36□□□□□ -1.55
PRIM1P49642 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PRIM1P49642 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.36□□□□□ -1.55
PRIM1P49642 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRIM1P49642 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRIM1P49642 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRIM1P49642 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRIM1P49642 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRIM1P49642 RNU6-727P-201ENST00000363592 107 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 RNU6-1180P-201ENST00000364935 107 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 RNU6-407P-201ENST00000365280 104 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 U8.11-201ENST00000384699 133 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 U8.12-201ENST00000384701 133 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 EI24P2-201ENST00000397776 1076 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.35□□□□□ -1.55
PRIM1P49642 AL365496.1-201ENST00000426885 215 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 PTMAP3-201ENST00000447474 330 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 U8.18-201ENST00000459285 133 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 AC090525.1-201ENST00000479116 478 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.35□□□□□ -1.55
PRIM1P49642 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.35□□□□□ -1.55
PRIM1P49642 SNORD11B-201ENST00000607707 90 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 MIR6868-201ENST00000611215 58 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.35□□□□□ -1.55
PRIM1P49642 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRIM1P49642 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRIM1P49642 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRIM1P49642 SCN1A-220ENST00000641603 12506 ntBASIC5.35□□□□□ -1.55
PRIM1P49642 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.34□□□□□ -1.55
PRIM1P49642 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PRIM1P49642 SNORD115-30-201ENST00000364117 82 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 RNU6-969P-201ENST00000383900 105 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 RNU6-429P-201ENST00000384582 108 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 RN7SKP156-201ENST00000410308 342 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 AL591419.1-201ENST00000427423 339 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 Z75741.1-201ENST00000446793 314 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.34□□□□□ -1.55
PRIM1P49642 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.34□□□□□ -1.55
PRIM1P49642 RNU5E-3P-201ENST00000515913 68 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 SNORA70.12-201ENST00000516084 153 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 AC026403.1-201ENST00000518938 295 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PRIM1P49642 MIR4724-201ENST00000579485 89 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRIM1P49642 AL451007.1-201ENST00000595491 289 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 AC015813.4-201ENST00000610469 179 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 AC019176.2-201ENST00000611579 315 ntBASIC5.34□□□□□ -1.55
PRIM1P49642 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PRIM1P49642 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.34□□□□□ -1.55
PRIM1P49642 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.34□□□□□ -1.55
PRIM1P49642 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.34□□□□□ -1.55
PRIM1P49642 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.34□□□□□ -1.56
PRIM1P49642 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PRIM1P49642 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
PRIM1P49642 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PRIM1P49642 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.33□□□□□ -1.56
PRIM1P49642 RNU6-884P-201ENST00000363889 107 ntBASIC5.33□□□□□ -1.56
PRIM1P49642 RNU6-622P-201ENST00000384272 103 ntBASIC5.33□□□□□ -1.56
PRIM1P49642 NDUFB4P6-201ENST00000436819 366 ntBASIC5.33□□□□□ -1.56
PRIM1P49642 HSPE1P13-201ENST00000451143 297 ntBASIC5.33□□□□□ -1.56
PRIM1P49642 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.33□□□□□ -1.56
PRIM1P49642 RPS26P28-201ENST00000470806 348 ntBASIC5.33□□□□□ -1.56
PRIM1P49642 RNU1-95P-201ENST00000516357 160 ntBASIC5.33□□□□□ -1.56
PRIM1P49642 RNU1-128P-201ENST00000516704 160 ntBASIC5.33□□□□□ -1.56
PRIM1P49642 MIR3200-201ENST00000580767 85 ntBASIC5.33□□□□□ -1.56
PRIM1P49642 AC011471.1-201ENST00000585766 187 ntBASIC5.33□□□□□ -1.56
PRIM1P49642 SNORD98-201ENST00000636377 67 ntBASIC5.33□□□□□ -1.56
PRIM1P49642 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PRIM1P49642 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRIM1P49642 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.33□□□□□ -1.56
PRIM1P49642 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRIM1P49642 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRIM1P49642 Z73965.1-201ENST00000623412 2297 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRIM1P49642 Y_RNA.341-201ENST00000365341 102 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 RNU6-460P-201ENST00000391158 108 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 RPL21P17-201ENST00000397467 475 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 RNU4-43P-201ENST00000410628 137 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 SNORA57.3-201ENST00000411095 141 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 AC108022.1-201ENST00000493466 478 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 RN7SL323P-201ENST00000494712 295 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 AC110768.1-201ENST00000509222 400 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 RNU6-589P-201ENST00000516485 107 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 AC023043.3-201ENST00000593113 385 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
PRIM1P49642 MIR6129-201ENST00000616087 109 ntBASIC5.32□□□□□ -1.56
PRIM1P49642 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PRIM1P49642 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PRIM1P49642 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5.32□□□□□ -1.56
PRIM1P49642 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRIM1P49642 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PRIM1P49642 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.31□□□□□ -1.56
PRIM1P49642 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PRIM1P49642 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.31□□□□□ -1.56
PRIM1P49642 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRIM1P49642 MIR367-201ENST00000362299 68 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 RNU6-454P-201ENST00000364292 107 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 Y_RNA.243-201ENST00000364481 109 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms