Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC048334.1-201ENST00000477975 159 ntBASIC0.38□□□□□ -2.35
SRP9P49458 SUMO2P16-201ENST00000519475 264 ntBASIC0.38□□□□□ -2.35
SRP9P49458 AL590705.4-201ENST00000532209 134 ntBASIC0.38□□□□□ -2.35
SRP9P49458 MIR3912-201ENST00000577566 105 ntBASIC0.38□□□□□ -2.35
SRP9P49458 AC004987.4-201ENST00000603383 338 ntBASIC0.38□□□□□ -2.35
SRP9P49458 AC124016.2-201ENST00000610058 665 ntBASIC0.38□□□□□ -2.35
SRP9P49458 AC243829.3-201ENST00000622177 108 ntBASIC0.38□□□□□ -2.35
SRP9P49458 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SRP9P49458 Y_RNA.354-201ENST00000365448 111 ntBASIC0.37□□□□□ -2.35
SRP9P49458 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
SRP9P49458 MIR200A-201ENST00000384875 90 ntBASIC0.37□□□□□ -2.35
SRP9P49458 MIR10A-201ENST00000385043 110 ntBASIC0.37□□□□□ -2.35
SRP9P49458 SNORA12.2-201ENST00000391040 156 ntBASIC0.37□□□□□ -2.35
SRP9P49458 MIR942-201ENST00000401111 86 ntBASIC0.37□□□□□ -2.35
SRP9P49458 AL603865.2-201ENST00000401679 213 ntBASIC0.37□□□□□ -2.35
SRP9P49458 RNA5SP111-201ENST00000411386 101 ntBASIC0.37□□□□□ -2.35
SRP9P49458 AL953862.1-201ENST00000423016 168 ntBASIC0.37□□□□□ -2.35
SRP9P49458 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
SRP9P49458 MTCO3P29-201ENST00000432119 779 ntBASIC0.37□□□□□ -2.35
SRP9P49458 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.37□□□□□ -2.35
SRP9P49458 RNU6-1132P-201ENST00000459214 107 ntBASIC0.37□□□□□ -2.35
SRP9P49458 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.37□□□□□ -2.35
SRP9P49458 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.37□□□□□ -2.35
SRP9P49458 Y_RNA.687-201ENST00000516558 91 ntBASIC0.37□□□□□ -2.35
SRP9P49458 RNU6-405P-201ENST00000516637 110 ntBASIC0.37□□□□□ -2.35
SRP9P49458 RNU6-467P-201ENST00000517027 110 ntBASIC0.37□□□□□ -2.35
SRP9P49458 AC087897.1-201ENST00000550134 156 ntBASIC0.37□□□□□ -2.35
SRP9P49458 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.37□□□□□ -2.35
SRP9P49458 MIR4709-201ENST00000577272 72 ntBASIC0.37□□□□□ -2.35
SRP9P49458 AC091135.1-201ENST00000585943 307 ntBASIC0.37□□□□□ -2.35
SRP9P49458 VN1R82P-201ENST00000601481 356 ntBASIC0.37□□□□□ -2.35
SRP9P49458 MIR15A-201ENST00000607334 83 ntBASIC0.37□□□□□ -2.35
SRP9P49458 MIR6515-201ENST00000619843 57 ntBASIC0.37□□□□□ -2.35
SRP9P49458 AC106858.1-201ENST00000637497 429 ntBASIC0.37□□□□□ -2.35
SRP9P49458 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.37□□□□□ -2.35
SRP9P49458 SMIM11P1-201ENST00000369586 178 ntBASIC0.36□□□□□ -2.35
SRP9P49458 RNU6-16P-201ENST00000384385 107 ntBASIC0.36□□□□□ -2.35
SRP9P49458 RPS3AP36-201ENST00000398190 775 ntBASIC0.36□□□□□ -2.35
SRP9P49458 MTCO1P17-201ENST00000411522 491 ntBASIC0.36□□□□□ -2.35
SRP9P49458 BTF3L4P1-201ENST00000413813 468 ntBASIC0.36□□□□□ -2.35
SRP9P49458 ELOCP9-201ENST00000418624 239 ntBASIC0.36□□□□□ -2.35
SRP9P49458 ARL5AP1-201ENST00000418991 388 ntBASIC0.36□□□□□ -2.35
SRP9P49458 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.36□□□□□ -2.35
SRP9P49458 AL355994.1-201ENST00000424379 260 ntBASIC0.36□□□□□ -2.35
SRP9P49458 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.36□□□□□ -2.35
SRP9P49458 SNORA31.4-201ENST00000516049 129 ntBASIC0.36□□□□□ -2.35
SRP9P49458 SNORA43.2-201ENST00000516652 128 ntBASIC0.36□□□□□ -2.35
SRP9P49458 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.36□□□□□ -2.35
SRP9P49458 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.36□□□□□ -2.35
SRP9P49458 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.36□□□□□ -2.35
SRP9P49458 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.36□□□□□ -2.35
SRP9P49458 AC099785.1-201ENST00000605697 437 ntBASIC0.36□□□□□ -2.35
SRP9P49458 AC006270.3-201ENST00000605967 1036 ntBASIC0.36□□□□□ -2.35
SRP9P49458 AC078880.5-201ENST00000617845 421 ntBASIC0.36□□□□□ -2.35
SRP9P49458 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
SRP9P49458 Y_RNA.796-201ENST00000364268 102 ntBASIC0.35□□□□□ -2.35
SRP9P49458 Y_RNA.799-201ENST00000364992 102 ntBASIC0.35□□□□□ -2.35
SRP9P49458 Y_RNA.355-201ENST00000365462 98 ntBASIC0.35□□□□□ -2.35
SRP9P49458 RNU6-438P-201ENST00000365561 103 ntBASIC0.35□□□□□ -2.35
SRP9P49458 RNU6-468P-201ENST00000384003 109 ntBASIC0.35□□□□□ -2.35
SRP9P49458 Y_RNA.508-201ENST00000384502 114 ntBASIC0.35□□□□□ -2.35
SRP9P49458 RNU1-139P-201ENST00000391307 165 ntBASIC0.35□□□□□ -2.35
SRP9P49458 MIR936-201ENST00000401264 98 ntBASIC0.35□□□□□ -2.35
SRP9P49458 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.35□□□□□ -2.35
SRP9P49458 RAB28P5-201ENST00000427490 651 ntBASIC0.35□□□□□ -2.35
SRP9P49458 AL627311.1-201ENST00000431514 115 ntBASIC0.35□□□□□ -2.35
SRP9P49458 AL445305.1-201ENST00000432577 575 ntBASIC0.35□□□□□ -2.35
SRP9P49458 MTCYBP42-201ENST00000444653 1130 ntBASIC0.35□□□□□ -2.35
SRP9P49458 RNU7-34P-201ENST00000459394 64 ntBASIC0.35□□□□□ -2.35
SRP9P49458 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.35□□□□□ -2.35
SRP9P49458 RNU6-496P-201ENST00000516145 99 ntBASIC0.35□□□□□ -2.35
SRP9P49458 AP003355.1-201ENST00000518956 587 ntBASIC0.35□□□□□ -2.35
SRP9P49458 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.35□□□□□ -2.35
SRP9P49458 OR8K2P-201ENST00000524645 927 ntBASIC0.35□□□□□ -2.35
SRP9P49458 AL132657.2-201ENST00000564417 358 ntBASIC0.35□□□□□ -2.35
SRP9P49458 AC091489.2-201ENST00000566263 604 ntBASIC0.35□□□□□ -2.35
SRP9P49458 VN1R87P-201ENST00000596706 487 ntBASIC0.35□□□□□ -2.35
SRP9P49458 AC024940.5-201ENST00000622889 474 ntBASIC0.35□□□□□ -2.35
SRP9P49458 AC134026.1-201ENST00000623249 2239 ntBASIC0.35□□□□□ -2.35
SRP9P49458 ELL2P3-201ENST00000457883 1602 ntBASIC0.35□□□□□ -2.35
SRP9P49458 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
SRP9P49458 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
SRP9P49458 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
SRP9P49458 RNU4-15P-201ENST00000362613 141 ntBASIC0.34□□□□□ -2.36
SRP9P49458 AL031577.2-201ENST00000404133 280 ntBASIC0.34□□□□□ -2.36
SRP9P49458 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.34□□□□□ -2.36
SRP9P49458 AC011233.1-201ENST00000422812 283 ntBASIC0.34□□□□□ -2.36
SRP9P49458 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.34□□□□□ -2.36
SRP9P49458 AC244023.1-201ENST00000426884 112 ntBASIC0.34□□□□□ -2.36
SRP9P49458 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.34□□□□□ -2.36
SRP9P49458 AC119751.4-201ENST00000507498 357 ntBASIC0.34□□□□□ -2.36
SRP9P49458 RNU6-1041P-201ENST00000516254 102 ntBASIC0.34□□□□□ -2.36
SRP9P49458 RNU6-677P-201ENST00000516914 101 ntBASIC0.34□□□□□ -2.36
SRP9P49458 AC242498.1-201ENST00000604134 111 ntBASIC0.34□□□□□ -2.36
SRP9P49458 AL136363.2-201ENST00000604173 851 ntBASIC0.34□□□□□ -2.36
SRP9P49458 AC105148.1-201ENST00000604961 409 ntBASIC0.34□□□□□ -2.36
SRP9P49458 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
SRP9P49458 AC126177.8-201ENST00000618339 1015 ntBASIC0.34□□□□□ -2.36
SRP9P49458 AC243994.1-201ENST00000618627 109 ntBASIC0.34□□□□□ -2.36
SRP9P49458 AL391994.1-201ENST00000254724 282 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms