Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRNA4P43681 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA4P43681 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA4P43681 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA4P43681 SNORD35B-201ENST00000363660 87 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 Y_RNA.281-201ENST00000364774 94 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 RPL21P17-201ENST00000397467 475 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 RPL23AP48-201ENST00000406913 488 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 U3.37-201ENST00000408528 213 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 MLLT10P1-201ENST00000418346 262 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.12□□□□□ -1.75
CHRNA4P43681 GPM6BP3-201ENST00000442797 145 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 AL359073.1-201ENST00000448036 403 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 AC091179.3-201ENST00000474761 144 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 RN7SKP12-201ENST00000516275 143 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 SNORA31.9-201ENST00000516429 84 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 RNA5SP290-201ENST00000517133 127 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 RN7SKP234-201ENST00000517173 224 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 AP004607.1-201ENST00000524456 203 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 AC107016.1-201ENST00000550463 337 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 MIR6830-201ENST00000636015 70 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRNA4P43681 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA4P43681 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA4P43681 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA4P43681 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRNA4P43681 AL359693.1-201ENST00000614959 2407 ntBASIC4.12□□□□□ -1.75
CHRNA4P43681 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CHRNA4P43681 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRNA4P43681 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA4P43681 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA4P43681 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA4P43681 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA4P43681 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA4P43681 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRNA4P43681 RNU6-942P-201ENST00000363002 107 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 RNU6-1205P-201ENST00000363625 106 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 RNU6-647P-201ENST00000364243 107 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 RNY3P5-201ENST00000384127 102 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 U6atac.2-201ENST00000408644 118 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 RNU6-710P-201ENST00000410424 105 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 RNA5SP31-201ENST00000411144 127 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 RPS3AP1-201ENST00000413190 320 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRNA4P43681 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA4P43681 HMGN2P32-201ENST00000444648 269 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA4P43681 RPL29P14-201ENST00000495837 428 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 RN7SKP19-201ENST00000516016 252 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 RNU6-781P-201ENST00000516377 101 ntBASIC4.11□□□□□ -1.75
CHRNA4P43681 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA4P43681 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA4P43681 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA4P43681 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA4P43681 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA4P43681 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA4P43681 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA4P43681 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA4P43681 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA4P43681 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA4P43681 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA4P43681 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA4P43681 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA4P43681 RNU6-1285P-201ENST00000363480 105 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 RNA5SP479-201ENST00000364858 117 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 Y_RNA.368-201ENST00000365547 113 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 MIR93-201ENST00000385024 80 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 SNORA48.7-201ENST00000391302 135 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 HSPE1P12-201ENST00000412576 301 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA4P43681 AP000705.1-201ENST00000454567 350 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 snoU13.6-201ENST00000458785 104 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 AL132838.2-201ENST00000492041 314 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 AC016632.1-201ENST00000503994 196 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA4P43681 RNU5F-2P-201ENST00000516066 82 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 RN7SKP21-201ENST00000516503 220 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA4P43681 AC018630.3-201ENST00000542637 96 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 MIR4724-201ENST00000579485 89 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 AC015813.4-201ENST00000610469 179 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 AC068724.3-201ENST00000625906 87 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA4P43681 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA4P43681 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CHRNA4P43681 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA4P43681 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CHRNA4P43681 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA4P43681 MAPK10-253ENST00000641010 4072 ntBASIC4.1□□□□□ -1.75
CHRNA4P43681 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA4P43681 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA4P43681 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA4P43681 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA4P43681 RNU6-454P-201ENST00000364292 107 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 RNA5SP130-201ENST00000364431 114 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 RNU6-1107P-201ENST00000364817 104 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CHRNA4P43681 RNU6-756P-201ENST00000383997 107 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 SNORA36A-201ENST00000384221 132 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 SNORA70E-201ENST00000384492 135 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms