Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AL356157.2-201ENST00000605122 111 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AC103810.6-201ENST00000606708 136 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AC046143.2-201ENST00000609789 160 ntBASIC2.21□□□□□ -2.06
SOX3P41225 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AL159153.1-201ENST00000619688 317 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AC007792.1-201ENST00000623023 402 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AC002543.1-201ENST00000299783 1954 ntBASIC2.21□□□□□ -2.06
SOX3P41225 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.21□□□□□ -2.06
SOX3P41225 AC005336.3-201ENST00000623833 2679 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AC007336.1-201ENST00000576365 3828 ntBASIC2.21□□□□□ -2.06
SOX3P41225 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX3P41225 OR56A5-201ENST00000340110 738 ntBASIC2.2□□□□□ -2.06
SOX3P41225 MIR21-201ENST00000362134 72 ntBASIC2.2□□□□□ -2.06
SOX3P41225 SNORA72.1-201ENST00000363485 129 ntBASIC2.2□□□□□ -2.06
SOX3P41225 SNORD114-30-201ENST00000364448 72 ntBASIC2.2□□□□□ -2.06
SOX3P41225 RNU1-138P-201ENST00000384093 164 ntBASIC2.2□□□□□ -2.06
SOX3P41225 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX3P41225 RNU2-25P-201ENST00000411041 191 ntBASIC2.2□□□□□ -2.06
SOX3P41225 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.2□□□□□ -2.06
SOX3P41225 AL590632.1-201ENST00000424289 371 ntBASIC2.2□□□□□ -2.06
SOX3P41225 RPL30P4-201ENST00000429309 333 ntBASIC2.2□□□□□ -2.06
SOX3P41225 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.2□□□□□ -2.06
SOX3P41225 AL031659.1-201ENST00000447075 539 ntBASIC2.2□□□□□ -2.06
SOX3P41225 RPL39P29-201ENST00000447779 157 ntBASIC2.2□□□□□ -2.06
SOX3P41225 PPP1R2P5-201ENST00000457256 603 ntBASIC2.2□□□□□ -2.06
SOX3P41225 snoU13.14-201ENST00000459372 104 ntBASIC2.2□□□□□ -2.06
SOX3P41225 AC073901.1-201ENST00000462471 408 ntBASIC2.2□□□□□ -2.06
SOX3P41225 RPL30P12-201ENST00000474666 353 ntBASIC2.2□□□□□ -2.06
SOX3P41225 MTCO1P29-201ENST00000496868 288 ntBASIC2.2□□□□□ -2.06
SOX3P41225 AC107222.1-201ENST00000510899 637 ntBASIC2.2□□□□□ -2.06
SOX3P41225 RNA5SP24-201ENST00000516478 95 ntBASIC2.2□□□□□ -2.06
SOX3P41225 RN7SKP40-201ENST00000517211 242 ntBASIC2.2□□□□□ -2.06
SOX3P41225 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.2□□□□□ -2.06
SOX3P41225 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.2□□□□□ -2.06
SOX3P41225 MIR548S-201ENST00000581352 82 ntBASIC2.2□□□□□ -2.06
SOX3P41225 MIR3616-201ENST00000584070 92 ntBASIC2.2□□□□□ -2.06
SOX3P41225 AP001836.1-201ENST00000604675 523 ntBASIC2.2□□□□□ -2.06
SOX3P41225 uc_338.15-201ENST00000615470 191 ntBASIC2.2□□□□□ -2.06
SOX3P41225 AL590808.1-201ENST00000618696 141 ntBASIC2.2□□□□□ -2.06
SOX3P41225 AC005858.4-201ENST00000623191 700 ntBASIC2.2□□□□□ -2.06
SOX3P41225 MIR1291-201ENST00000627649 87 ntBASIC2.2□□□□□ -2.06
SOX3P41225 AL133216.2-202ENST00000634512 349 ntBASIC2.2□□□□□ -2.06
SOX3P41225 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX3P41225 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.2□□□□□ -2.06
SOX3P41225 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX3P41225 MTND4P27-201ENST00000450813 1354 ntBASIC2.2□□□□□ -2.06
SOX3P41225 RNU1-57P-201ENST00000384491 166 ntBASIC2.19□□□□□ -2.06
SOX3P41225 RNU6-325P-201ENST00000411132 105 ntBASIC2.19□□□□□ -2.06
SOX3P41225 AP000275.1-201ENST00000411943 390 ntBASIC2.19□□□□□ -2.06
SOX3P41225 CYCSP48-201ENST00000417124 323 ntBASIC2.19□□□□□ -2.06
SOX3P41225 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.19□□□□□ -2.06
SOX3P41225 PDCL2P1-201ENST00000419302 352 ntBASIC2.19□□□□□ -2.06
SOX3P41225 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.19□□□□□ -2.06
SOX3P41225 EIF4EP4-201ENST00000424916 578 ntBASIC2.19□□□□□ -2.06
SOX3P41225 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.19□□□□□ -2.06
SOX3P41225 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.19□□□□□ -2.06
SOX3P41225 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.19□□□□□ -2.06
SOX3P41225 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.19□□□□□ -2.06
SOX3P41225 MTND4P18-201ENST00000447010 465 ntBASIC2.19□□□□□ -2.06
SOX3P41225 MTND1P17-201ENST00000448961 204 ntBASIC2.19□□□□□ -2.06
SOX3P41225 RNU7-187P-201ENST00000458985 68 ntBASIC2.19□□□□□ -2.06
SOX3P41225 AC080013.2-201ENST00000460866 323 ntBASIC2.19□□□□□ -2.06
SOX3P41225 AC130509.1-201ENST00000464158 433 ntBASIC2.19□□□□□ -2.06
SOX3P41225 RPL39P5-202ENST00000512505 151 ntBASIC2.19□□□□□ -2.06
SOX3P41225 SNORA25.11-201ENST00000515935 105 ntBASIC2.19□□□□□ -2.06
SOX3P41225 RNU6-612P-201ENST00000516909 102 ntBASIC2.19□□□□□ -2.06
SOX3P41225 RNU6-273P-201ENST00000516937 96 ntBASIC2.19□□□□□ -2.06
SOX3P41225 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.19□□□□□ -2.06
SOX3P41225 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.19□□□□□ -2.06
SOX3P41225 AL121579.1-201ENST00000555129 305 ntBASIC2.19□□□□□ -2.06
SOX3P41225 AC091544.4-201ENST00000555268 342 ntBASIC2.19□□□□□ -2.06
SOX3P41225 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
SOX3P41225 AC090616.3-201ENST00000582184 217 ntBASIC2.19□□□□□ -2.06
SOX3P41225 MIR3199-1-201ENST00000582434 88 ntBASIC2.19□□□□□ -2.06
SOX3P41225 MIR3117-201ENST00000584034 78 ntBASIC2.19□□□□□ -2.06
SOX3P41225 AL355073.2-201ENST00000612106 557 ntBASIC2.19□□□□□ -2.06
SOX3P41225 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
SOX3P41225 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.18□□□□□ -2.06
SOX3P41225 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.18□□□□□ -2.06
SOX3P41225 AC016717.2-201ENST00000609089 5141 ntBASIC2.18□□□□□ -2.06
SOX3P41225 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SOX3P41225 RNU6-1285P-201ENST00000363480 105 ntBASIC2.18□□□□□ -2.06
SOX3P41225 RNU6-1317P-201ENST00000364582 104 ntBASIC2.18□□□□□ -2.06
SOX3P41225 SNORD32A-201ENST00000364805 84 ntBASIC2.18□□□□□ -2.06
SOX3P41225 RNU6-43P-201ENST00000384302 107 ntBASIC2.18□□□□□ -2.06
SOX3P41225 MIR186-201ENST00000384988 86 ntBASIC2.18□□□□□ -2.06
SOX3P41225 MIR218-1-201ENST00000384999 110 ntBASIC2.18□□□□□ -2.06
SOX3P41225 RNU4-53P-201ENST00000410828 140 ntBASIC2.18□□□□□ -2.06
SOX3P41225 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.18□□□□□ -2.06
SOX3P41225 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.18□□□□□ -2.06
SOX3P41225 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.18□□□□□ -2.06
SOX3P41225 AL445687.1-201ENST00000439946 251 ntBASIC2.18□□□□□ -2.06
SOX3P41225 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.18□□□□□ -2.06
SOX3P41225 U8.21-201ENST00000459536 136 ntBASIC2.18□□□□□ -2.06
SOX3P41225 RPS29P27-201ENST00000463711 170 ntBASIC2.18□□□□□ -2.06
SOX3P41225 AC023141.11-201ENST00000508864 202 ntBASIC2.18□□□□□ -2.06
SOX3P41225 Y_RNA.682-201ENST00000516457 100 ntBASIC2.18□□□□□ -2.06
SOX3P41225 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.18□□□□□ -2.06
SOX3P41225 AP002770.2-201ENST00000543613 532 ntBASIC2.18□□□□□ -2.06
SOX3P41225 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms