Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GDNFP39905 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GDNFP39905 AC134026.1-201ENST00000623249 2239 ntBASIC3.56□□□□□ -1.84
GDNFP39905 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
GDNFP39905 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.56□□□□□ -1.84
GDNFP39905 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.56□□□□□ -1.84
GDNFP39905 Z82217.1-201ENST00000625157 8149 ntBASIC3.56□□□□□ -1.84
GDNFP39905 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
GDNFP39905 IPO8P1-201ENST00000455509 3109 ntBASIC3.55□□□□□ -1.84
GDNFP39905 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GDNFP39905 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GDNFP39905 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
GDNFP39905 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GDNFP39905 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GDNFP39905 AC126755.2-208ENST00000327792 462 ntBASIC3.55□□□□□ -1.84
GDNFP39905 AC138969.1-213ENST00000331436 462 ntBASIC3.55□□□□□ -1.84
GDNFP39905 RNU6-103P-201ENST00000363686 107 ntBASIC3.55□□□□□ -1.84
GDNFP39905 RNU6-454P-201ENST00000364292 107 ntBASIC3.55□□□□□ -1.84
GDNFP39905 Y_RNA.293-201ENST00000364908 93 ntBASIC3.55□□□□□ -1.84
GDNFP39905 MIR626-201ENST00000385032 94 ntBASIC3.55□□□□□ -1.84
GDNFP39905 HMGN2P8-201ENST00000391458 268 ntBASIC3.55□□□□□ -1.84
GDNFP39905 AL159169.1-201ENST00000421119 127 ntBASIC3.55□□□□□ -1.84
GDNFP39905 AL135790.2-201ENST00000437701 267 ntBASIC3.55□□□□□ -1.84
GDNFP39905 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.55□□□□□ -1.84
GDNFP39905 HMGN2P21-201ENST00000447764 270 ntBASIC3.55□□□□□ -1.84
GDNFP39905 AC074290.1-201ENST00000448883 135 ntBASIC3.55□□□□□ -1.84
GDNFP39905 RPL26P9-201ENST00000457466 433 ntBASIC3.55□□□□□ -1.84
GDNFP39905 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.55□□□□□ -1.84
GDNFP39905 RN7SL98P-201ENST00000462271 300 ntBASIC3.55□□□□□ -1.84
GDNFP39905 RPS29P19-201ENST00000479709 171 ntBASIC3.55□□□□□ -1.84
GDNFP39905 RPS29P20-201ENST00000489592 171 ntBASIC3.55□□□□□ -1.84
GDNFP39905 RPS27AP10-201ENST00000496103 208 ntBASIC3.55□□□□□ -1.84
GDNFP39905 Vault.1-201ENST00000516474 102 ntBASIC3.55□□□□□ -1.84
GDNFP39905 RNU6-107P-201ENST00000516643 102 ntBASIC3.55□□□□□ -1.84
GDNFP39905 AC136628.3-201ENST00000521868 290 ntBASIC3.55□□□□□ -1.84
GDNFP39905 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.55□□□□□ -1.84
GDNFP39905 AC090877.1-201ENST00000561418 344 ntBASIC3.55□□□□□ -1.84
GDNFP39905 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.55□□□□□ -1.84
GDNFP39905 AL078604.3-201ENST00000615580 211 ntBASIC3.55□□□□□ -1.84
GDNFP39905 AC013791.1-201ENST00000616619 62 ntBASIC3.55□□□□□ -1.84
GDNFP39905 uc_338.13-201ENST00000618243 179 ntBASIC3.55□□□□□ -1.84
GDNFP39905 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.55□□□□□ -1.84
GDNFP39905 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.55□□□□□ -1.84
GDNFP39905 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.55□□□□□ -1.84
GDNFP39905 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
GDNFP39905 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GDNFP39905 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GDNFP39905 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.54□□□□□ -1.84
GDNFP39905 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GDNFP39905 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
GDNFP39905 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GDNFP39905 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
GDNFP39905 AC073073.2-201ENST00000609827 2578 ntBASIC3.54□□□□□ -1.84
GDNFP39905 Y_RNA.24-201ENST00000362508 103 ntBASIC3.54□□□□□ -1.84
GDNFP39905 Y_RNA.172-201ENST00000363765 102 ntBASIC3.54□□□□□ -1.84
GDNFP39905 RNU6-1048P-201ENST00000364054 107 ntBASIC3.54□□□□□ -1.84
GDNFP39905 SNORA56-201ENST00000383966 129 ntBASIC3.54□□□□□ -1.84
GDNFP39905 Y_RNA.415-201ENST00000384012 112 ntBASIC3.54□□□□□ -1.84
GDNFP39905 SNORA18.3-201ENST00000384122 132 ntBASIC3.54□□□□□ -1.84
GDNFP39905 MIR208B-201ENST00000401172 77 ntBASIC3.54□□□□□ -1.84
GDNFP39905 SNORA11F-201ENST00000408237 128 ntBASIC3.54□□□□□ -1.84
GDNFP39905 AC017083.1-201ENST00000428093 483 ntBASIC3.54□□□□□ -1.84
GDNFP39905 AL500522.2-201ENST00000448562 343 ntBASIC3.54□□□□□ -1.84
GDNFP39905 AC146507.2-201ENST00000460608 476 ntBASIC3.54□□□□□ -1.84
GDNFP39905 RN7SL481P-201ENST00000477764 299 ntBASIC3.54□□□□□ -1.84
GDNFP39905 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.54□□□□□ -1.84
GDNFP39905 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.54□□□□□ -1.84
GDNFP39905 RNU6-453P-201ENST00000516819 85 ntBASIC3.54□□□□□ -1.84
GDNFP39905 AC109810.1-201ENST00000534066 224 ntBASIC3.54□□□□□ -1.84
GDNFP39905 HSPE1P5-201ENST00000561489 272 ntBASIC3.54□□□□□ -1.84
GDNFP39905 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.54□□□□□ -1.84
GDNFP39905 AC090897.2-201ENST00000581715 130 ntBASIC3.54□□□□□ -1.84
GDNFP39905 MIR6798-201ENST00000612887 67 ntBASIC3.54□□□□□ -1.84
GDNFP39905 AL391261.4-201ENST00000616012 481 ntBASIC3.54□□□□□ -1.84
GDNFP39905 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.54□□□□□ -1.84
GDNFP39905 MIR7641-1-201ENST00000627518 61 ntBASIC3.54□□□□□ -1.84
GDNFP39905 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
GDNFP39905 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GDNFP39905 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GDNFP39905 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
GDNFP39905 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.54□□□□□ -1.84
GDNFP39905 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GDNFP39905 ADAM3A-203ENST00000461344 2157 ntBASIC3.53□□□□□ -1.84
GDNFP39905 AF127577.6-201ENST00000623352 2191 ntBASIC3.53□□□□□ -1.84
GDNFP39905 AC010329.5-201ENST00000623497 2174 ntBASIC3.53□□□□□ -1.84
GDNFP39905 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GDNFP39905 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
GDNFP39905 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.53□□□□□ -1.84
GDNFP39905 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
GDNFP39905 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
GDNFP39905 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.53□□□□□ -1.84
GDNFP39905 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GDNFP39905 RNU1-62P-201ENST00000362599 164 ntBASIC3.53□□□□□ -1.84
GDNFP39905 RNA5SP167-201ENST00000365461 116 ntBASIC3.53□□□□□ -1.84
GDNFP39905 SNORA8.3-201ENST00000384679 139 ntBASIC3.53□□□□□ -1.84
GDNFP39905 RNU6-376P-201ENST00000384731 106 ntBASIC3.53□□□□□ -1.84
GDNFP39905 U3.26-201ENST00000391236 204 ntBASIC3.53□□□□□ -1.84
GDNFP39905 AC006461.1-201ENST00000412637 326 ntBASIC3.53□□□□□ -1.84
GDNFP39905 RPS29P17-201ENST00000430795 166 ntBASIC3.53□□□□□ -1.84
GDNFP39905 AC011998.1-201ENST00000433403 117 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms