Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RNU1-107P-201ENST00000516617 154 ntBASIC0.81□□□□□ -2.28
CASQ1P31415 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.81□□□□□ -2.28
CASQ1P31415 MIR5697-201ENST00000578045 78 ntBASIC0.81□□□□□ -2.28
CASQ1P31415 AC012507.3-201ENST00000603556 477 ntBASIC0.81□□□□□ -2.28
CASQ1P31415 MTND3P19-201ENST00000603825 345 ntBASIC0.81□□□□□ -2.28
CASQ1P31415 AC121334.2-201ENST00000605387 271 ntBASIC0.81□□□□□ -2.28
CASQ1P31415 AC080078.3-201ENST00000605407 463 ntBASIC0.81□□□□□ -2.28
CASQ1P31415 PART1_2.1-201ENST00000612397 250 ntBASIC0.81□□□□□ -2.28
CASQ1P31415 AL133216.2-202ENST00000634512 349 ntBASIC0.81□□□□□ -2.28
CASQ1P31415 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
CASQ1P31415 RNU6-1026P-201ENST00000384465 108 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 SNORD12-201ENST00000391002 90 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 AL117342.1-201ENST00000404861 406 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.8□□□□□ -2.28
CASQ1P31415 AL353777.1-201ENST00000425552 326 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 MTND1P32-201ENST00000433043 938 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 MTND5P15-201ENST00000434246 349 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.8□□□□□ -2.28
CASQ1P31415 AL360271.2-201ENST00000447710 161 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 RPL39P38-201ENST00000467018 153 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 RNU6-123P-201ENST00000516163 102 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 SNORA19.3-201ENST00000516165 130 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 RNU6-201P-201ENST00000517100 61 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.8□□□□□ -2.28
CASQ1P31415 AC025423.5-201ENST00000550230 219 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.8□□□□□ -2.28
CASQ1P31415 MIR5692A1-201ENST00000580523 69 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.8□□□□□ -2.28
CASQ1P31415 AC105129.3-201ENST00000605455 485 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 AL139286.2-201ENST00000606838 396 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 AP002360.4-201ENST00000606980 481 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 AC008147.4-201ENST00000617570 1204 ntBASIC0.8□□□□□ -2.28
CASQ1P31415 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CASQ1P31415 RNU4-79P-201ENST00000362764 141 ntBASIC0.79□□□□□ -2.28
CASQ1P31415 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CASQ1P31415 RNU6-910P-201ENST00000390844 107 ntBASIC0.79□□□□□ -2.28
CASQ1P31415 AC114482.1-201ENST00000418010 247 ntBASIC0.79□□□□□ -2.28
CASQ1P31415 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.79□□□□□ -2.28
CASQ1P31415 CALM2P2-201ENST00000428512 440 ntBASIC0.79□□□□□ -2.28
CASQ1P31415 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.79□□□□□ -2.28
CASQ1P31415 RNA5SP168-201ENST00000516642 112 ntBASIC0.79□□□□□ -2.28
CASQ1P31415 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.79□□□□□ -2.28
CASQ1P31415 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.79□□□□□ -2.28
CASQ1P31415 AC008752.3-201ENST00000588113 712 ntBASIC0.79□□□□□ -2.28
CASQ1P31415 U4.7-201ENST00000638126 106 ntBASIC0.79□□□□□ -2.28
CASQ1P31415 U3.9-201ENST00000363823 204 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 SNORA72.2-201ENST00000365028 127 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 SNORA4.2-201ENST00000365313 147 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 AL590135.1-201ENST00000422215 156 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 AC019205.3-201ENST00000424573 156 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 RAB28P5-201ENST00000427490 651 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 AC016700.2-201ENST00000446011 156 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.78□□□□□ -2.28
CASQ1P31415 AP000797.1-201ENST00000478870 387 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 AC015911.1-201ENST00000495111 156 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 ARL2BPP4-201ENST00000506854 471 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 AC074344.1-201ENST00000512823 224 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 SNORA31.2-201ENST00000516019 134 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 RNU6-1098P-201ENST00000516772 96 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 MTATP6P15-201ENST00000527233 835 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 SNORA59B-202ENST00000578183 701 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 MIR3923-201ENST00000579521 83 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 AC068790.6-201ENST00000602558 258 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 AL353149.1-201ENST00000610667 244 ntBASIC0.78□□□□□ -2.28
CASQ1P31415 Y_RNA.110-201ENST00000363220 99 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 Y_RNA.132-201ENST00000363421 102 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 RNU6-105P-201ENST00000363909 104 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 RNU6-1141P-201ENST00000364520 107 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CASQ1P31415 RPL22P18-201ENST00000417197 377 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.77□□□□□ -2.29
CASQ1P31415 AC244670.1-201ENST00000436879 112 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.77□□□□□ -2.29
CASQ1P31415 MTND1P12-201ENST00000455231 147 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 AL049829.1-201ENST00000465411 156 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 COX6CP14-201ENST00000469580 174 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.77□□□□□ -2.29
CASQ1P31415 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.77□□□□□ -2.29
CASQ1P31415 RNU6-856P-201ENST00000516959 98 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 RNU6-1003P-201ENST00000517099 105 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 AC107934.1-201ENST00000522215 217 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.77□□□□□ -2.29
CASQ1P31415 AL606834.3-201ENST00000602615 496 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 RPL17P51-201ENST00000605218 238 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.77□□□□□ -2.29
CASQ1P31415 MIR6857-201ENST00000613267 93 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.77□□□□□ -2.29
CASQ1P31415 RNA5SP201-201ENST00000410316 124 ntBASIC0.76□□□□□ -2.29
CASQ1P31415 RPS3AP1-201ENST00000413190 320 ntBASIC0.76□□□□□ -2.29
CASQ1P31415 C1DP2-201ENST00000418167 426 ntBASIC0.76□□□□□ -2.29
CASQ1P31415 RPS3AP37-201ENST00000419176 745 ntBASIC0.76□□□□□ -2.29
CASQ1P31415 SNRPGP7-201ENST00000469016 106 ntBASIC0.76□□□□□ -2.29
CASQ1P31415 RAP1BP2-201ENST00000478270 544 ntBASIC0.76□□□□□ -2.29
CASQ1P31415 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.76□□□□□ -2.29
CASQ1P31415 AC108078.2-201ENST00000510750 236 ntBASIC0.76□□□□□ -2.29
CASQ1P31415 AC021231.3-201ENST00000558497 370 ntBASIC0.76□□□□□ -2.29
CASQ1P31415 MIR4307-201ENST00000582802 84 ntBASIC0.76□□□□□ -2.29
CASQ1P31415 AL592221.1-201ENST00000605266 382 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms